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Aliases for PIR48145 Gene

Subcategory (RNA class) for PIR48145 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48145 Gene

No Aliases found

ORGUL Members for PIR48145 Gene

Previous GeneCards Identifiers for PIR48145 Gene

  • GC01M150551
  • GC01M150584
  • GC01M150597
  • GC01M150603

No data available for External Ids for PIR48145 Gene

Summaries for PIR48145 Gene

GeneCards Summary for PIR48145 Gene

PIR48145 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48145 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48145 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48145 Gene

Genomics for PIR48145 Gene

GeneHancer (GH) Regulatory Elements for PIR48145 Gene

Promoters and enhancers for PIR48145 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J150557 Promoter/Enhancer 2.6 EPDnew Ensembl ENCODE dbSUPER 0.4 +9.7 9691 23.1 CLOCK MLX DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC RN7SL600P MCL1 SETDB1 PIP5K1A PI4KB PRPF3 ARNT GOLPH3L HORMAD1 SF3B4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR48145 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48145 Gene

Genomic Locations for PIR48145 Gene
chr1:150,578,969-150,578,995
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr1:150,551,445-150,551,471
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR48145 Gene

Genes around PIR48145 on UCSC Golden Path with GeneCards custom track

PIR48145 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48145 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48145 Gene

Function for PIR48145 Gene

Phenotypes From GWAS Catalog for PIR48145 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48145 Gene

Localization for PIR48145 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48145 Gene

Pathways & Interactions for PIR48145 Gene

SuperPathways for PIR48145 Gene

No Data Available

Interacting Proteins for PIR48145 Gene

Gene Ontology (GO) - Biological Process for PIR48145 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48145 Gene

Drugs & Compounds for PIR48145 Gene

No Compound Related Data Available

Transcripts for PIR48145 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48145 Gene

No ASD Table

Relevant External Links for PIR48145 Gene

GeneLoc Exon Structure for
PIR48145

No data available for mRNA/cDNA for PIR48145 Gene

Expression for PIR48145 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48145 Gene

Orthologs for PIR48145 Gene

No data available for Orthologs and Evolution for PIR48145 Gene

Paralogs for PIR48145 Gene

No data available for Paralogs for PIR48145 Gene

Variants for PIR48145 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48145 Gene

Disorders for PIR48145 Gene

No disorders were found for PIR48145 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48145 Gene

Publications for PIR48145 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48145 Gene

Sources for PIR48145 Gene

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