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Aliases for PIR48108 Gene

Subcategory (RNA class) for PIR48108 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48108 Gene

No Aliases found

ORGUL Members for PIR48108 Gene

Previous GeneCards Identifiers for PIR48108 Gene

  • GC15M043705

No data available for External Ids for PIR48108 Gene

Summaries for PIR48108 Gene

GeneCards Summary for PIR48108 Gene

PIR48108 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48108 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48108 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48108 Gene

Genomics for PIR48108 Gene

GeneHancer (GH) Regulatory Elements for PIR48108 Gene

Promoters and enhancers for PIR48108 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J043410 Enhancer 0.7 ENCODE 0.7 +2.2 2214 1 PKNOX1 ARNT TAL1 BACH1 CEBPG E4F1 NCOA2 FOSL1 ZNF316 POLR2A TGM7 ZSCAN29 TUBGCP4 PIR48108 PIR39526 TP53BP1
GH15J043440 Enhancer 1.2 Ensembl ENCODE 0.3 -27.8 -27798 2 HDGF FOXA2 ATF1 ARNT ARID4B SIN3A ZNF2 YY1 E2F8 ARID2 ADAL TGM7 MAP1A TP53BP1 PIR42778 PIR48108
GH15J043434 Enhancer 0.5 ENCODE 0.3 -21.4 -21354 0.4 ZNF639 ZNF766 ZBTB11 GABPA ZSCAN29 TUBGCP4 HYPK MIR1282 SERF2 PIR42778 PIR48108 TP53BP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR48108 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48108 Gene

Genomic Locations for PIR48108 Gene
chr15:43,413,267-43,413,294
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr15:43,705,465-43,705,492
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR48108 Gene

Genes around PIR48108 on UCSC Golden Path with GeneCards custom track

PIR48108 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48108 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48108 Gene

Function for PIR48108 Gene

Phenotypes From GWAS Catalog for PIR48108 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48108 Gene

Localization for PIR48108 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48108 Gene

Pathways & Interactions for PIR48108 Gene

SuperPathways for PIR48108 Gene

No Data Available

Interacting Proteins for PIR48108 Gene

Gene Ontology (GO) - Biological Process for PIR48108 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48108 Gene

Drugs & Compounds for PIR48108 Gene

No Compound Related Data Available

Transcripts for PIR48108 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48108 Gene

No ASD Table

Relevant External Links for PIR48108 Gene

GeneLoc Exon Structure for
PIR48108

No data available for mRNA/cDNA for PIR48108 Gene

Expression for PIR48108 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48108 Gene

Orthologs for PIR48108 Gene

No data available for Orthologs and Evolution for PIR48108 Gene

Paralogs for PIR48108 Gene

No data available for Paralogs for PIR48108 Gene

Variants for PIR48108 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48108 Gene

Disorders for PIR48108 Gene

No disorders were found for PIR48108 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48108 Gene

Publications for PIR48108 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48108 Gene

Sources for PIR48108 Gene

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