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Aliases for PIR48064 Gene

Subcategory (RNA class) for PIR48064 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48064 Gene

No Aliases found

ORGUL Members for PIR48064 Gene

Previous GeneCards Identifiers for PIR48064 Gene

  • GC06M034199
  • GC06M034539
  • GC06M035559
  • GC06M036273
  • GC06M036646
  • GC06M037000
  • GC06M037351
  • GC06M037703
  • GC06M038053

No data available for External Ids for PIR48064 Gene

Summaries for PIR48064 Gene

GeneCards Summary for PIR48064 Gene

PIR48064 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48064 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48064 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48064 Gene

Genomics for PIR48064 Gene

GeneHancer (GH) Regulatory Elements for PIR48064 Gene

Promoters and enhancers for PIR48064 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J034230 Enhancer 0.7 ENCODE dbSUPER 650.7 +0.7 690 0.9 SCRT1 BCOR SCRT2 ZMYM3 KDM1A ZNF623 SPI1 PIR48064 SMIM29 GC06M038962 CYCSP55
GH06J034232 Enhancer 0.2 dbSUPER 650.7 -1.0 -1016 0.6 GC06M038962 PIR48064
GH06J034226 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +3.8 3819 4.1 BRD4 CTCF HDGF LEF1 NFRKB IRF3 BACH1 RARA ZKSCAN1 ETS1 RPS10 DAXX WDR46 LEMD2 RGL2 RPS18 SMIM29 PIR48064 CYCSP55 GC06M038962
GH06J034223 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.6 7625 2.7 HDGF SMAD1 ARNT ARID4B SIN3A YBX1 DMAP1 ZNF2 IRF4 YY1 RPS10 VPS52 TAF11 DAXX LEMD2 WDR46 ITPR3 RGL2 KIFC1 HCG25
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR48064 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48064 Gene

Genomic Locations for PIR48064 Gene
chr6:34,232,035-34,232,062
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr6:34,199,812-34,199,839
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR48064 Gene

Genes around PIR48064 on UCSC Golden Path with GeneCards custom track

PIR48064 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48064 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48064 Gene

Function for PIR48064 Gene

Phenotypes From GWAS Catalog for PIR48064 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48064 Gene

Localization for PIR48064 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48064 Gene

Pathways & Interactions for PIR48064 Gene

SuperPathways for PIR48064 Gene

No Data Available

Interacting Proteins for PIR48064 Gene

Gene Ontology (GO) - Biological Process for PIR48064 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48064 Gene

Drugs & Compounds for PIR48064 Gene

No Compound Related Data Available

Transcripts for PIR48064 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48064 Gene

No ASD Table

Relevant External Links for PIR48064 Gene

GeneLoc Exon Structure for
PIR48064

No data available for mRNA/cDNA for PIR48064 Gene

Expression for PIR48064 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48064 Gene

Orthologs for PIR48064 Gene

No data available for Orthologs and Evolution for PIR48064 Gene

Paralogs for PIR48064 Gene

No data available for Paralogs for PIR48064 Gene

Variants for PIR48064 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48064 Gene

Disorders for PIR48064 Gene

No disorders were found for PIR48064 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48064 Gene

Publications for PIR48064 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48064 Gene

Sources for PIR48064 Gene

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