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Aliases for PIR48024 Gene

Subcategory (RNA class) for PIR48024 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR48024 Gene

No Aliases found

ORGUL Members for PIR48024 Gene

Previous GeneCards Identifiers for PIR48024 Gene

  • GC16P011275

No data available for External Ids for PIR48024 Gene

Summaries for PIR48024 Gene

GeneCards Summary for PIR48024 Gene

PIR48024 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR48024 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR48024 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR48024 Gene

Genomics for PIR48024 Gene

GeneHancer (GH) Regulatory Elements for PIR48024 Gene

Promoters and enhancers for PIR48024 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J011180 Enhancer 1.3 FANTOM5 Ensembl ENCODE 650.7 +0.6 584 4 HDGF PKNOX1 SMAD1 RB1 ARID4B STAT5A BATF KLF5 IRF4 RAD21 PIR48024 RMI2 PRM2 ENSG00000212228 ENSG00000263033 LITAF CLEC16A GC16P010485
GH16J011190 Enhancer 0.4 Ensembl 0.4 +9.1 9129 0.2 GLIS1 ZFP36 ZMYM3 PIR48024 ENSG00000263033 CLEC16A GC16P010485
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR48024 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR48024 Gene

Genomic Locations for PIR48024 Gene
chr16:11,181,572-11,181,598
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr16:11,275,429-11,275,455
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR48024 Gene

Genes around PIR48024 on UCSC Golden Path with GeneCards custom track

PIR48024 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR48024 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR48024 Gene

Function for PIR48024 Gene

Phenotypes From GWAS Catalog for PIR48024 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR48024 Gene

Localization for PIR48024 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR48024 Gene

Pathways & Interactions for PIR48024 Gene

SuperPathways for PIR48024 Gene

No Data Available

Interacting Proteins for PIR48024 Gene

Gene Ontology (GO) - Biological Process for PIR48024 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR48024 Gene

Drugs & Compounds for PIR48024 Gene

No Compound Related Data Available

Transcripts for PIR48024 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR48024 Gene

No ASD Table

Relevant External Links for PIR48024 Gene

GeneLoc Exon Structure for
PIR48024

No data available for mRNA/cDNA for PIR48024 Gene

Expression for PIR48024 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR48024 Gene

Orthologs for PIR48024 Gene

No data available for Orthologs and Evolution for PIR48024 Gene

Paralogs for PIR48024 Gene

No data available for Paralogs for PIR48024 Gene

Variants for PIR48024 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR48024 Gene

Disorders for PIR48024 Gene

No disorders were found for PIR48024 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR48024 Gene

Publications for PIR48024 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR48024 Gene

Sources for PIR48024 Gene

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