Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR47863 Gene

Subcategory (RNA class) for PIR47863 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR47863 Gene

No Aliases found

ORGUL Members for PIR47863 Gene

No data available for External Ids for PIR47863 Gene

Summaries for PIR47863 Gene

GeneCards Summary for PIR47863 Gene

PIR47863 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47863 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR47863

Additional gene information for PIR47863 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47863 Gene

Genomics for PIR47863 Gene

GeneHancer (GH) Regulatory Elements for PIR47863 Gene

Promoters and enhancers for PIR47863 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J021974 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 650.7 +1.3 1299 1.4 PKNOX1 KLF17 MZF1 SIN3A ZNF48 ZNF335 GLIS2 ZNF213 SCRT2 KLF7 CDKN2A GC09M021977 PIR47863 MTAP CDKN2B UBA52P6 CDKN2A-DT ENSG00000264545
GH09J021977 Enhancer 0.4 dbSUPER 650.7 -1.6 -1589 0.7 ZFHX2 EGR2 GC09M021977 PIR47863 MTAP CDKN2A CDKN2B-AS1 ENSG00000264545
GH09J021992 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.4 -18.4 -18404 3.7 HDGF PKNOX1 SIN3A FEZF1 ZNF2 GLIS2 RUNX3 SP3 TSHZ1 ZNF518A CDKN2B-AS1 ENSG00000266446 CDKN2A CDKN2B PIR47863 GC09M021977 ENSG00000264545
GH09J021989 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -13.9 -13917 1.2 ZBTB21 SUZ12 ZNF335 ZFHX2 GLIS2 ZNF366 PATZ1 ZSCAN5C ZNF600 KLF8 KLHL9 CDKN2A-DT UBA52P6 ENSG00000265194 MTAP CDKN2B CDKN2B-AS1 CDKN2A GC09M021977 PIR47863
GH09J021986 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -11.4 -11441 2.6 PKNOX1 ZSCAN4 NFRKB BACH1 RFX5 YY1 POLR2A ZSCAN5C MAFK EZH2 CDKN2B CDKN2A-DT UBA52P6 CDKN2A CDKN2B-AS1 PIR47863 GC09M021977 ENSG00000264545
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR47863 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47863 Gene

Genomic Locations for PIR47863 Gene
chr9:21,976,232-21,976,264
(GRCh38/hg38)
Size:
33 bases
Orientation:
Minus strand
chr9:21,976,231-21,976,263
(GRCh37/hg19)
Size:
33 bases
Orientation:
Minus strand

Genomic View for PIR47863 Gene

Genes around PIR47863 on UCSC Golden Path with GeneCards custom track

PIR47863 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47863 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR47863 Gene

ORGUL Member Location for PIR47863 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47863 Gene

Function for PIR47863 Gene

Phenotypes From GWAS Catalog for PIR47863 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47863 Gene

Localization for PIR47863 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47863 Gene

Pathways & Interactions for PIR47863 Gene

SuperPathways for PIR47863 Gene

No Data Available

Interacting Proteins for PIR47863 Gene

Gene Ontology (GO) - Biological Process for PIR47863 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47863 Gene

Drugs & Compounds for PIR47863 Gene

No Compound Related Data Available

Transcripts for PIR47863 Gene

fRNAdb Secondary structures for PIR47863 Gene

  • FR268037

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47863 Gene

No ASD Table

Relevant External Links for PIR47863 Gene

GeneLoc Exon Structure for
PIR47863

No data available for mRNA/cDNA for PIR47863 Gene

Expression for PIR47863 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47863 Gene

Orthologs for PIR47863 Gene

No data available for Orthologs and Evolution for PIR47863 Gene

Paralogs for PIR47863 Gene

No data available for Paralogs for PIR47863 Gene

Variants for PIR47863 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47863 Gene

Disorders for PIR47863 Gene

No disorders were found for PIR47863 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47863 Gene

Publications for PIR47863 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR47863 Gene

Sources for PIR47863 Gene

Content
Loading form....