Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR47825 Gene

Subcategory (RNA class) for PIR47825 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR47825 Gene

No Aliases found

ORGUL Members for PIR47825 Gene

Previous GeneCards Identifiers for PIR47825 Gene

  • GC15P093188
  • GC15P093433
  • GC15P093876
  • GC15P094198
  • GC15P094540
  • GC15P092648
  • GC15P092850
  • GC15P093056
  • GC15P094156
  • GC15P094936
  • GC15P095181
  • GC15P095421
  • GC15P095658

No data available for External Ids for PIR47825 Gene

Summaries for PIR47825 Gene

GeneCards Summary for PIR47825 Gene

PIR47825 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47825 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR47825

Additional gene information for PIR47825 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47825 Gene

Genomics for PIR47825 Gene

GeneHancer (GH) Regulatory Elements for PIR47825 Gene

Promoters and enhancers for PIR47825 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J092588 Enhancer 0.2 FANTOM5 650.7 +1.6 1591 0.3 GC15P096084 GC15P096097 GC15P096098 GC15P096101 GC15P096104 GC15P096108 GC15P096112 GC15P096115 GC15P096116 GC15P096117
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47825 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47825 Gene

Genomic Locations for PIR47825 Gene
chr15:92,586,778-92,586,809
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand
chr15:93,130,008-93,130,039
(GRCh37/hg19)
Size:
32 bases
Orientation:
Plus strand

Genomic View for PIR47825 Gene

Genes around PIR47825 on UCSC Golden Path with GeneCards custom track

PIR47825 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47825 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR47825 Gene

ORGUL Member Location for PIR47825 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47825 Gene

Function for PIR47825 Gene

Phenotypes From GWAS Catalog for PIR47825 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47825 Gene

Localization for PIR47825 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47825 Gene

Pathways & Interactions for PIR47825 Gene

SuperPathways for PIR47825 Gene

No Data Available

Interacting Proteins for PIR47825 Gene

Gene Ontology (GO) - Biological Process for PIR47825 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47825 Gene

Drugs & Compounds for PIR47825 Gene

No Compound Related Data Available

Transcripts for PIR47825 Gene

fRNAdb Secondary structures for PIR47825 Gene

  • FR177848

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47825 Gene

No ASD Table

Relevant External Links for PIR47825 Gene

GeneLoc Exon Structure for
PIR47825

No data available for mRNA/cDNA for PIR47825 Gene

Expression for PIR47825 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47825 Gene

Orthologs for PIR47825 Gene

No data available for Orthologs and Evolution for PIR47825 Gene

Paralogs for PIR47825 Gene

No data available for Paralogs for PIR47825 Gene

Variants for PIR47825 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47825 Gene

Disorders for PIR47825 Gene

No disorders were found for PIR47825 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47825 Gene

Publications for PIR47825 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR47825 Gene

Sources for PIR47825 Gene

Content
Loading form....