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Aliases for PIR47812 Gene

Subcategory (RNA class) for PIR47812 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR47812 Gene

No Aliases found

ORGUL Members for PIR47812 Gene

Previous GeneCards Identifiers for PIR47812 Gene

  • GC10M045905

No data available for External Ids for PIR47812 Gene

Summaries for PIR47812 Gene

GeneCards Summary for PIR47812 Gene

PIR47812 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47812 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR47812 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47812 Gene

Genomics for PIR47812 Gene

GeneHancer (GH) Regulatory Elements for PIR47812 Gene

Promoters and enhancers for PIR47812 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J045408 Enhancer 1 FANTOM5 ENCODE dbSUPER 650.7 +0.6 620 0.3 MEIS2 PKNOX1 PHF21A DACH1 MAFG DPF2 ZNF395 ZKSCAN1 ZNF316 ZNF512 PIR47812 ALOX5 LOC102724323 WASHC2C GC10M045366 GC10M045391
GH10J045407 Enhancer 0.7 ENCODE 650.7 +2.0 1971 0.1 HDAC1 MEIS2 PKNOX1 TEAD4 TAL1 FOSL1 TCF12 ZNF766 ZNF316 NCOR1 PIR47812 ALOX5 LOC102724323 GC10M045366 GC10M045391
GH10J045409 Enhancer 0.7 ENCODE 650.7 +1.9 1881 0 HDAC1 MEIS2 PKNOX1 TEAD4 TAL1 FOSL1 TCF12 ZNF766 ZNF316 NCOR1 PIR47812 ALOX5 LOC102724323 GC10M045366 GC10M045391
GH10J045404 Enhancer 0.9 ENCODE dbSUPER 0.4 +5.4 5412 0.2 HDAC1 ATF1 TEAD4 FOSL1 CTBP1 VEZF1 NFE2 ETV6 RUNX3 SMARCE1 PIR47812 GC10M045366 GC10M045391 ALOX5
GH10J045405 Enhancer 0.8 ENCODE dbSUPER 0.4 +5.2 5161 0.2 HDAC1 MEIS2 ATF1 NRF1 TAL1 CBFA2T3 DPF2 FOSL1 HDAC2 CBFA2T2 PIR47812 GC10M045366 GC10M045391 ALOX5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47812 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47812 Gene

Genomic Locations for PIR47812 Gene
chr10:45,409,702-45,409,729
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr10:45,905,150-45,905,177
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR47812 Gene

Genes around PIR47812 on UCSC Golden Path with GeneCards custom track

PIR47812 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47812 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47812 Gene

Function for PIR47812 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47812 Gene

Localization for PIR47812 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47812 Gene

Pathways & Interactions for PIR47812 Gene

SuperPathways for PIR47812 Gene

No Data Available

Interacting Proteins for PIR47812 Gene

Gene Ontology (GO) - Biological Process for PIR47812 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47812 Gene

Drugs & Compounds for PIR47812 Gene

No Compound Related Data Available

Transcripts for PIR47812 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47812 Gene

No ASD Table

Relevant External Links for PIR47812 Gene

GeneLoc Exon Structure for
PIR47812

No data available for mRNA/cDNA for PIR47812 Gene

Expression for PIR47812 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47812 Gene

Orthologs for PIR47812 Gene

No data available for Orthologs and Evolution for PIR47812 Gene

Paralogs for PIR47812 Gene

No data available for Paralogs for PIR47812 Gene

Variants for PIR47812 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47812 Gene

Disorders for PIR47812 Gene

No disorders were found for PIR47812 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47812 Gene

Publications for PIR47812 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR47812 Gene

Sources for PIR47812 Gene

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