Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR47747 Gene

Subcategory (RNA class) for PIR47747 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR47747 Gene

No Aliases found

ORGUL Members for PIR47747 Gene

Previous GeneCards Identifiers for PIR47747 Gene

  • GC11M060638

No data available for External Ids for PIR47747 Gene

Summaries for PIR47747 Gene

GeneCards Summary for PIR47747 Gene

PIR47747 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47747 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR47747 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47747 Gene

Genomics for PIR47747 Gene

GeneHancer (GH) Regulatory Elements for PIR47747 Gene

Promoters and enhancers for PIR47747 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J060871 Enhancer 1 Ensembl ENCODE dbSUPER 650.7 -1.4 -1365 2.7 RXRA HLF MAX REST RARA ZFP69B ATF4 ZNF316 NFIC SMARCA4 PIR47747 PRPF19 ENSG00000255959 CCDC86 ENSG00000257052 MS4A10 ENSG00000255845 ZP1
GH11J060904 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.3 -34.7 -34650 3.3 PKNOX1 SMAD1 ZFP64 ARID4B SIN3A DMAP1 YY1 POLR2B ZNF207 ZNF143 PRPF19 ENSG00000257052 GC11P060908 PIR49215 PTGDR2 PIR47747
GH11J060880 Enhancer 0.9 dbSUPER 0.4 -9.7 -9707 0.6 FOXA2 MLX ARID4B DMAP1 ZNF48 TCF12 SLC30A9 NFKBIZ SP5 MXD4 PTGDR2 ENSG00000256813 ENSG00000255959 CCDC86 PRPF19 ENSG00000257052 MS4A18 PIR47747
GH11J060890 Enhancer 0.9 ENCODE dbSUPER 0.4 -18.9 -18930 0.2 GTF2F1 PKNOX1 USF1 ZNF507 CTBP1 POLR2B GATA3 POLR2A ELK1 CBFA2T2 PIR47747 PRPF19
GH11J060891 Enhancer 1 ENCODE dbSUPER 0.3 -20.1 -20094 1.4 HDAC1 SMAD1 TCF12 ZNF766 GATA2 GATAD2B ZEB2 NFIC MTA1 KLF16 PRPF19 PIR47747
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47747 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47747 Gene

Genomic Locations for PIR47747 Gene
chr11:60,871,288-60,871,314
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr11:60,638,761-60,638,787
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR47747 Gene

Genes around PIR47747 on UCSC Golden Path with GeneCards custom track

PIR47747 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47747 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47747 Gene

Function for PIR47747 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47747 Gene

Localization for PIR47747 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47747 Gene

Pathways & Interactions for PIR47747 Gene

SuperPathways for PIR47747 Gene

No Data Available

Interacting Proteins for PIR47747 Gene

Gene Ontology (GO) - Biological Process for PIR47747 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47747 Gene

Drugs & Compounds for PIR47747 Gene

No Compound Related Data Available

Transcripts for PIR47747 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47747 Gene

No ASD Table

Relevant External Links for PIR47747 Gene

GeneLoc Exon Structure for
PIR47747

No data available for mRNA/cDNA for PIR47747 Gene

Expression for PIR47747 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47747 Gene

Orthologs for PIR47747 Gene

No data available for Orthologs and Evolution for PIR47747 Gene

Paralogs for PIR47747 Gene

No data available for Paralogs for PIR47747 Gene

Variants for PIR47747 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47747 Gene

Disorders for PIR47747 Gene

No disorders were found for PIR47747 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47747 Gene

Publications for PIR47747 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR47747 Gene

Sources for PIR47747 Gene

Content
Loading form....