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Aliases for PIR47741 Gene

Subcategory (RNA class) for PIR47741 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR47741 Gene

No Aliases found

ORGUL Members for PIR47741 Gene

Previous GeneCards Identifiers for PIR47741 Gene

  • GC08M030411

No data available for External Ids for PIR47741 Gene

Summaries for PIR47741 Gene

GeneCards Summary for PIR47741 Gene

PIR47741 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47741 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR47741

Additional gene information for PIR47741 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47741 Gene

Genomics for PIR47741 Gene

GeneHancer (GH) Regulatory Elements for PIR47741 Gene

Promoters and enhancers for PIR47741 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J030554 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -2.0 -2026 4.3 RB1 ARID4B SIN3A ZNF2 RAD21 YY1 ZNF614 EGR1 ARID2 ZNF143 RBPMS ENSG00000253112 RBPMS-AS1 SMIM18 GC08M030557 PIR47741 PIR39743
GH08J030559 Enhancer 0.3 dbSUPER 0.4 -6.0 -5951 1.5 POLR2A ENSG00000253112 RBPMS RBPMS-AS1 GTF2E2 PIR39743 GC08M030557 PIR47741
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47741 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47741 Gene

Genomic Locations for PIR47741 Gene
chr8:30,554,292-30,554,323
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand
chr8:30,411,809-30,411,840
(GRCh37/hg19)
Size:
32 bases
Orientation:
Minus strand

Genomic View for PIR47741 Gene

Genes around PIR47741 on UCSC Golden Path with GeneCards custom track

PIR47741 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47741 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR47741 Gene

ORGUL Member Location for PIR47741 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47741 Gene

Function for PIR47741 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47741 Gene

Localization for PIR47741 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47741 Gene

Pathways & Interactions for PIR47741 Gene

SuperPathways for PIR47741 Gene

No Data Available

Interacting Proteins for PIR47741 Gene

Gene Ontology (GO) - Biological Process for PIR47741 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47741 Gene

Drugs & Compounds for PIR47741 Gene

No Compound Related Data Available

Transcripts for PIR47741 Gene

fRNAdb Secondary structures for PIR47741 Gene

  • FR396454

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47741 Gene

No ASD Table

Relevant External Links for PIR47741 Gene

GeneLoc Exon Structure for
PIR47741

No data available for mRNA/cDNA for PIR47741 Gene

Expression for PIR47741 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47741 Gene

Orthologs for PIR47741 Gene

No data available for Orthologs and Evolution for PIR47741 Gene

Paralogs for PIR47741 Gene

No data available for Paralogs for PIR47741 Gene

Variants for PIR47741 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47741 Gene

Disorders for PIR47741 Gene

No disorders were found for PIR47741 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47741 Gene

Publications for PIR47741 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR47741 Gene

Sources for PIR47741 Gene

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