Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR47734 Gene

Subcategory (RNA class) for PIR47734 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR47734 Gene

No Aliases found

ORGUL Members for PIR47734 Gene

No data available for External Ids for PIR47734 Gene

Summaries for PIR47734 Gene

GeneCards Summary for PIR47734 Gene

PIR47734 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47734 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR47734 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47734 Gene

Genomics for PIR47734 Gene

GeneHancer (GH) Regulatory Elements for PIR47734 Gene

Promoters and enhancers for PIR47734 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J040137 Enhancer 0.9 ENCODE 0.7 +3.3 3262 1.6 PKNOX1 FOXA2 MLX TCF12 ZNF766 GATA2 ATF7 MIER2 ZNF592 KAT8 PIR47734 GC06P043159
GH06J040112 Enhancer 0.3 ENCODE 0.3 +29.2 29184 1 CTCF PIR47734 GC06P043159
GH06J040108 Enhancer 0.2 ENCODE 0.3 +32.8 32796 0.9 PIR47734 GC06P043159
GH06J040073 Enhancer 0.3 ENCODE 0.2 +66.9 66905 2.5 NR2F1 GC06P043159 PIR47734
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47734 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47734 Gene

Genomic Locations for PIR47734 Gene
chr6:40,141,685-40,141,713
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr6:40,109,424-40,109,452
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR47734 Gene

Genes around PIR47734 on UCSC Golden Path with GeneCards custom track

PIR47734 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47734 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47734 Gene

Function for PIR47734 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47734 Gene

Localization for PIR47734 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47734 Gene

Pathways & Interactions for PIR47734 Gene

SuperPathways for PIR47734 Gene

No Data Available

Interacting Proteins for PIR47734 Gene

Gene Ontology (GO) - Biological Process for PIR47734 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47734 Gene

Drugs & Compounds for PIR47734 Gene

No Compound Related Data Available

Transcripts for PIR47734 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47734 Gene

No ASD Table

Relevant External Links for PIR47734 Gene

GeneLoc Exon Structure for
PIR47734

No data available for mRNA/cDNA for PIR47734 Gene

Expression for PIR47734 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47734 Gene

Orthologs for PIR47734 Gene

No data available for Orthologs and Evolution for PIR47734 Gene

Paralogs for PIR47734 Gene

No data available for Paralogs for PIR47734 Gene

Variants for PIR47734 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47734 Gene

Disorders for PIR47734 Gene

No disorders were found for PIR47734 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47734 Gene

Publications for PIR47734 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR47734 Gene

Sources for PIR47734 Gene

Content
Loading form....