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Aliases for PIR47710 Gene

Subcategory (RNA class) for PIR47710 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR47710 Gene

No Aliases found

ORGUL Members for PIR47710 Gene

Previous GeneCards Identifiers for PIR47710 Gene

  • GC17P038327

No data available for External Ids for PIR47710 Gene

Summaries for PIR47710 Gene

GeneCards Summary for PIR47710 Gene

PIR47710 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47710 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR47710 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47710 Gene

Genomics for PIR47710 Gene

GeneHancer (GH) Regulatory Elements for PIR47710 Gene

Promoters and enhancers for PIR47710 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J040175 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.4 +5.9 5873 2.5 HDGF RB1 RFX5 ZEB1 ZNF335 EGR1 ZNF143 EGR2 SP3 GATAD2B RAPGEFL1 CASC3 MSL1 CDC6 ENSG00000266208 KRTAP4-6 PIR47710 GC17P040124
GH17J040167 Enhancer 1 ENCODE dbSUPER 0.7 -2.6 -2620 1.2 HDGF ELF3 PKNOX1 RB1 ARID4B SIN3A DNMT3B RAD21 ETS1 RFX5 CASC3 MSL1 MED24 RARA ENSG00000266208 TCAP PIR47710 MIR6866 GC17P040124
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47710 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47710 Gene

Genomic Locations for PIR47710 Gene
chr17:40,171,069-40,171,098
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr17:38,327,322-38,327,351
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR47710 Gene

Genes around PIR47710 on UCSC Golden Path with GeneCards custom track

PIR47710 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47710 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47710 Gene

Function for PIR47710 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47710 Gene

Localization for PIR47710 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47710 Gene

Pathways & Interactions for PIR47710 Gene

SuperPathways for PIR47710 Gene

No Data Available

Interacting Proteins for PIR47710 Gene

Gene Ontology (GO) - Biological Process for PIR47710 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47710 Gene

Drugs & Compounds for PIR47710 Gene

No Compound Related Data Available

Transcripts for PIR47710 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47710 Gene

No ASD Table

Relevant External Links for PIR47710 Gene

GeneLoc Exon Structure for
PIR47710

No data available for mRNA/cDNA for PIR47710 Gene

Expression for PIR47710 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47710 Gene

Orthologs for PIR47710 Gene

No data available for Orthologs and Evolution for PIR47710 Gene

Paralogs for PIR47710 Gene

No data available for Paralogs for PIR47710 Gene

Variants for PIR47710 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47710 Gene

Disorders for PIR47710 Gene

No disorders were found for PIR47710 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47710 Gene

Publications for PIR47710 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR47710 Gene

Sources for PIR47710 Gene

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