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Aliases for PIR47705 Gene

Subcategory (RNA class) for PIR47705 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR47705 Gene

No Aliases found

Previous GeneCards Identifiers for PIR47705 Gene

  • GC19P050190
  • GC19P050204

No data available for External Ids for PIR47705 Gene

Summaries for PIR47705 Gene

GeneCards Summary for PIR47705 Gene

PIR47705 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47705 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR47705

Additional gene information for PIR47705 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47705 Gene

Genomics for PIR47705 Gene

GeneHancer (GH) Regulatory Elements for PIR47705 Gene

Promoters and enhancers for PIR47705 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J049684 Promoter 0.8 EPDnew 650.7 -1.9 -1894 0.1 CTCF XRCC5 POLR2A ZNF143 SMC3 ZNF444 GC19P049687 GC19P049689 PIR47705 PRMT1 MIR5088
GH19J049685 Enhancer 0.6 ENCODE 0.7 -2.1 -2068 0.1 HDGF CTCF SMAD5 ZNF621 XRCC5 POLR2A SMC3 ZNF143 ZNF444 SUPT5H GC19P049687 GC19P049689 MIR5088 PIR47705 PRMT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47705 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47705 Gene

Genomic Locations for PIR47705 Gene
chr19:49,686,627-49,686,657
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr19:50,189,884-50,189,914
(GRCh37/hg19)
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR47705 Gene

Genes around PIR47705 on UCSC Golden Path with GeneCards custom track

PIR47705 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47705 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR47705 Gene

ORGUL Member Location for PIR47705 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47705 Gene

Function for PIR47705 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47705 Gene

Localization for PIR47705 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47705 Gene

Pathways & Interactions for PIR47705 Gene

SuperPathways for PIR47705 Gene

No Data Available

Interacting Proteins for PIR47705 Gene

Gene Ontology (GO) - Biological Process for PIR47705 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47705 Gene

Drugs & Compounds for PIR47705 Gene

No Compound Related Data Available

Transcripts for PIR47705 Gene

fRNAdb Secondary structures for PIR47705 Gene

  • FR352882

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47705 Gene

No ASD Table

Relevant External Links for PIR47705 Gene

GeneLoc Exon Structure for
PIR47705

No data available for mRNA/cDNA for PIR47705 Gene

Expression for PIR47705 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47705 Gene

Orthologs for PIR47705 Gene

No data available for Orthologs and Evolution for PIR47705 Gene

Paralogs for PIR47705 Gene

No data available for Paralogs for PIR47705 Gene

Variants for PIR47705 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47705 Gene

Disorders for PIR47705 Gene

No disorders were found for PIR47705 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47705 Gene

Publications for PIR47705 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR47705 Gene

Sources for PIR47705 Gene

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