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Aliases for PIR47647 Gene

Subcategory (RNA class) for PIR47647 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR47647 Gene

No Aliases found

ORGUL Members for PIR47647 Gene

Previous GeneCards Identifiers for PIR47647 Gene

  • GC01P045096

No data available for External Ids for PIR47647 Gene

Summaries for PIR47647 Gene

GeneCards Summary for PIR47647 Gene

PIR47647 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47647 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR47647 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47647 Gene

Genomics for PIR47647 Gene

GeneHancer (GH) Regulatory Elements for PIR47647 Gene

Promoters and enhancers for PIR47647 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J044628 Promoter/Enhancer 2 Ensembl ENCODE dbSUPER 600.7 +0.9 929 6.7 HDGF ZFX ELF3 MNT CBFA2T2 NKRF POLR2A MLLT1 ZNF121 GTF2F1 PIR47647 TOE1 DMAP1 ARMH1 KDM4A MUTYH CCDC17 ARTN RNU5F-1 ERI3
GH01J044616 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -11.8 -11780 3.9 ZKSCAN8 CBFA2T2 NFIB MCM2 SP7 GLIS2 IKZF1 ZBTB8A ZNF600 PRDM10 MUTYH ARTN KIF2C RNU6-369P DMAP1 ARMH1 PIR47647 MIR5584 RNF220
GH01J044637 Enhancer 1 ENCODE dbSUPER 0.4 +7.2 7196 1 CC2D1A CBFA2T2 TRIM24 EGR1 SMARCA4 GMEB1 DPF2 PHF21A ATF1 REST DMAP1 PIR47647 GC01P044661 TMEM53 RNF220
GH01J044609 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -20.5 -20503 1.8 HDGF ZFX CC2D1A CTCF CBFA2T2 YY1 SP7 TRIM24 MZF1 RAD21 RNU6-369P ERI3 RNF220 DMAP1 PIR47647 MIR5584
GH01J044653 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +22.3 22281 1.4 CC2D1A CTCF SP7 RAD21 GLIS2 RXRA ARID2 ZIC2 ZNF143 REST ARMH1 GC01P044661 PIR47647 TMEM53
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47647 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47647 Gene

Genomic Locations for PIR47647 Gene
chr1:44,630,619-44,630,646
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr1:45,096,291-45,096,318
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR47647 Gene

Genes around PIR47647 on UCSC Golden Path with GeneCards custom track

PIR47647 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47647 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47647 Gene

Proteins for PIR47647 Gene

Post-translational modifications for PIR47647 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR47647 Gene

Domains & Families for PIR47647 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR47647 Gene

Function for PIR47647 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47647 Gene

Localization for PIR47647 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47647 Gene

Pathways & Interactions for PIR47647 Gene

PathCards logo

SuperPathways for PIR47647 Gene

No Data Available

Interacting Proteins for PIR47647 Gene

Gene Ontology (GO) - Biological Process for PIR47647 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47647 Gene

Drugs & Compounds for PIR47647 Gene

No Compound Related Data Available

Transcripts for PIR47647 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47647 Gene

No ASD Table

Relevant External Links for PIR47647 Gene

GeneLoc Exon Structure for
PIR47647

No data available for mRNA/cDNA for PIR47647 Gene

Expression for PIR47647 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47647 Gene

Orthologs for PIR47647 Gene

No data available for Orthologs and Evolution for PIR47647 Gene

Paralogs for PIR47647 Gene

No data available for Paralogs for PIR47647 Gene

Variants for PIR47647 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47647 Gene

Disorders for PIR47647 Gene

No disorders were found for PIR47647 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47647 Gene

Publications for PIR47647 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR47647 Gene

Products for PIR47647 Gene

Sources for PIR47647 Gene

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