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Aliases for PIR47430 Gene

Subcategory (RNA class) for PIR47430 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR47430 Gene

No Aliases found

ORGUL Members for PIR47430 Gene

Previous GeneCards Identifiers for PIR47430 Gene

  • GC20M033850
  • GC09P006623

No data available for External Ids for PIR47430 Gene

Summaries for PIR47430 Gene

GeneCards Summary for PIR47430 Gene

PIR47430 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47430 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR47430

Additional gene information for PIR47430 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47430 Gene

Genomics for PIR47430 Gene

GeneHancer (GH) Regulatory Elements for PIR47430 Gene

Promoters and enhancers for PIR47430 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J018794 Enhancer 0.2 Ensembl 600.7 +0.3 348 1 PIR47430 GC08P018838 PSD3
GH08J018808 Promoter/Enhancer 1.1 EPDnew Ensembl ENCODE 0.4 +14.6 14648 1.2 ZNF629 MNT CREB1 PSD3 PIR47430 GC08P018838
GH08J018804 Enhancer 0.5 Ensembl 0.4 +10.3 10349 0.6 YY1 RAD21 HNF4A RXRA REST PIR47430 GC08P018838 PSD3
GH08J018821 Enhancer 0.6 dbSUPER 0.3 +28.9 28860 3.1 CBFA2T2 RFX1 ATF1 ZNF316 NFE2 MAFG TCF12 TAL1 TEAD4 EMSY PSD3 GC08P018838 PIR47430
GH08J018814 Enhancer 0.5 ENCODE 0.3 +20.2 20215 0.1 CTCF ZSCAN21 GABPA RAD21 SMC3 ZNF654 GC08P018838 PIR47430 PSD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47430 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47430 Gene

Genomic Locations for PIR47430 Gene
chr8:18,794,152-18,794,182
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr9:6,623,388-6,623,418
(GRCh37/hg19)
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR47430 Gene

Genes around PIR47430 on UCSC Golden Path with GeneCards custom track

PIR47430 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47430 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR47430 Gene

ORGUL Member Location for PIR47430 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47430 Gene

Proteins for PIR47430 Gene

Post-translational modifications for PIR47430 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR47430 Gene

Domains & Families for PIR47430 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR47430 Gene

Function for PIR47430 Gene

Phenotypes From GWAS Catalog for PIR47430 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47430 Gene

Localization for PIR47430 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47430 Gene

Pathways & Interactions for PIR47430 Gene

PathCards logo

SuperPathways for PIR47430 Gene

No Data Available

Interacting Proteins for PIR47430 Gene

Gene Ontology (GO) - Biological Process for PIR47430 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47430 Gene

Drugs & Compounds for PIR47430 Gene

No Compound Related Data Available

Transcripts for PIR47430 Gene

fRNAdb Secondary structures for PIR47430 Gene

  • FR111751
  • FR273550

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47430 Gene

No ASD Table

Relevant External Links for PIR47430 Gene

GeneLoc Exon Structure for
PIR47430

No data available for mRNA/cDNA for PIR47430 Gene

Expression for PIR47430 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47430 Gene

Orthologs for PIR47430 Gene

No data available for Orthologs and Evolution for PIR47430 Gene

Paralogs for PIR47430 Gene

No data available for Paralogs for PIR47430 Gene

Variants for PIR47430 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47430 Gene

Disorders for PIR47430 Gene

No disorders were found for PIR47430 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47430 Gene

Publications for PIR47430 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR47430 Gene

Products for PIR47430 Gene

Sources for PIR47430 Gene

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