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Aliases for PIR47353 Gene

Subcategory (RNA class) for PIR47353 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR47353 Gene

No Aliases found

ORGUL Members for PIR47353 Gene

Previous GeneCards Identifiers for PIR47353 Gene

  • GC01P038681

No data available for External Ids for PIR47353 Gene

Summaries for PIR47353 Gene

GeneCards Summary for PIR47353 Gene

PIR47353 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47353 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR47353 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47353 Gene

Genomics for PIR47353 Gene

GeneHancer (GH) Regulatory Elements for PIR47353 Gene

Promoters and enhancers for PIR47353 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J038246 Enhancer 1.2 VISTA ENCODE 0.3 +31.1 31135 1.4 ELF3 MEIS2 SOX13 PKNOX1 MAX RAD21 RARA YY1 NFYB NR2F6 PIR47353 GC01P038354
GH01J038262 Enhancer 1.3 VISTA ENCODE 0.2 +48.7 48690 4.3 PKNOX1 FOXA2 ZFP64 ETS1 ZNF766 GATA2 ATF7 SP5 ATF4 SMARCA4 PIR47353 GC01P038354
GH01J038291 Enhancer 1 Ensembl ENCODE 0.2 +76.3 76320 0.7 HDAC1 HDGF PKNOX1 SMAD1 ATF1 NFRKB SIN3A ZBTB40 YY1 POLR2B GC01P038354 PIR47353
GH01J038269 Enhancer 0.9 VISTA ENCODE dbSUPER 0.2 +54.7 54650 2.7 SP1 NANOG POLR2A POU5F1 SIN3A CTBP2 ETS1 PIR47353 GC01P038354
GH01J038220 Enhancer 0.4 ENCODE 0.4 +5.8 5782 2.3 ZNF316 NANOG ZMYM3 PIR47353 GC01P038354
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47353 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47353 Gene

Genomic Locations for PIR47353 Gene
chr1:38,215,989-38,216,018
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr1:38,681,661-38,681,690
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR47353 Gene

Genes around PIR47353 on UCSC Golden Path with GeneCards custom track

PIR47353 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47353 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47353 Gene

Function for PIR47353 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47353 Gene

Localization for PIR47353 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47353 Gene

Pathways & Interactions for PIR47353 Gene

SuperPathways for PIR47353 Gene

No Data Available

Interacting Proteins for PIR47353 Gene

Gene Ontology (GO) - Biological Process for PIR47353 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47353 Gene

Drugs & Compounds for PIR47353 Gene

No Compound Related Data Available

Transcripts for PIR47353 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47353 Gene

No ASD Table

Relevant External Links for PIR47353 Gene

GeneLoc Exon Structure for
PIR47353

No data available for mRNA/cDNA for PIR47353 Gene

Expression for PIR47353 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47353 Gene

Orthologs for PIR47353 Gene

No data available for Orthologs and Evolution for PIR47353 Gene

Paralogs for PIR47353 Gene

No data available for Paralogs for PIR47353 Gene

Variants for PIR47353 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47353 Gene

Disorders for PIR47353 Gene

No disorders were found for PIR47353 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47353 Gene

Publications for PIR47353 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR47353 Gene

Sources for PIR47353 Gene

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