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Aliases for PIR47308 Gene

Subcategory (RNA class) for PIR47308 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR47308 Gene

No Aliases found

ORGUL Members for PIR47308 Gene

Previous GeneCards Identifiers for PIR47308 Gene

  • GC21M045957
  • GC21M046085
  • GC21M046344
  • GC21M046502
  • GC21M046685
  • GC21M044542
  • GC21M044660
  • GC21M045804
  • GC21M044790
  • GC21M044926
  • GC21M045052
  • GC21M045191
  • GC21M045331
  • GC21M045460
  • GC21M045607
  • GC21M045719

No data available for External Ids for PIR47308 Gene

Summaries for PIR47308 Gene

GeneCards Summary for PIR47308 Gene

PIR47308 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47308 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR47308 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47308 Gene

Genomics for PIR47308 Gene

GeneHancer (GH) Regulatory Elements for PIR47308 Gene

Promoters and enhancers for PIR47308 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J044482 Enhancer 0.9 ENCODE 600.7 -0.8 -825 0.2 ELF3 POLR2A TFE3 SP1 PPARG SP5 KAT8 ZNF24 RXRA CEBPA GC21M046623 GC21M046627 GC21M046630 GC21M046633 GC21M046641 GC21M046806 GC21M046843 GC21M046869 GC21M046888 GC21M046889
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47308 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47308 Gene

Genomic Locations for PIR47308 Gene
chr21:44,482,029-44,482,058
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr21:45,901,912-45,901,941
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR47308 Gene

Genes around PIR47308 on UCSC Golden Path with GeneCards custom track

PIR47308 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47308 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47308 Gene

Proteins for PIR47308 Gene

Post-translational modifications for PIR47308 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR47308 Gene

Domains & Families for PIR47308 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR47308 Gene

Function for PIR47308 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47308 Gene

Localization for PIR47308 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47308 Gene

Pathways & Interactions for PIR47308 Gene

PathCards logo

SuperPathways for PIR47308 Gene

No Data Available

Interacting Proteins for PIR47308 Gene

Gene Ontology (GO) - Biological Process for PIR47308 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47308 Gene

Drugs & Compounds for PIR47308 Gene

No Compound Related Data Available

Transcripts for PIR47308 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47308 Gene

No ASD Table

Relevant External Links for PIR47308 Gene

GeneLoc Exon Structure for
PIR47308

No data available for mRNA/cDNA for PIR47308 Gene

Expression for PIR47308 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47308 Gene

Orthologs for PIR47308 Gene

No data available for Orthologs and Evolution for PIR47308 Gene

Paralogs for PIR47308 Gene

No data available for Paralogs for PIR47308 Gene

Variants for PIR47308 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47308 Gene

Disorders for PIR47308 Gene

No disorders were found for PIR47308 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47308 Gene

Publications for PIR47308 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR47308 Gene

Products for PIR47308 Gene

Sources for PIR47308 Gene

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