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Aliases for PIR47140 Gene

Subcategory (RNA class) for PIR47140 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR47140 Gene

No Aliases found

ORGUL Members for PIR47140 Gene

Previous GeneCards Identifiers for PIR47140 Gene

  • GC19P010836

No data available for External Ids for PIR47140 Gene

Summaries for PIR47140 Gene

GeneCards Summary for PIR47140 Gene

PIR47140 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47140 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR47140 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47140 Gene

Genomics for PIR47140 Gene

GeneHancer (GH) Regulatory Elements for PIR47140 Gene

Promoters and enhancers for PIR47140 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I010726 Enhancer 0.6 ENCODE dbSUPER 550.8 +1.3 1264 1.1 MZF1 ZBTB33 PIR47140 ILF3-AS1 SMARCA4 SLC44A2 DNM2 MIR4748
GH19I010725 Enhancer 0.5 dbSUPER 550.8 +0.2 188 0.7 BCOR HDAC2 ZMYM3 KDM1A PIR47140 SLC44A2 DNM2 MIR4748
GH19I010724 Enhancer 0.5 ENCODE dbSUPER 550.8 -0.7 -665 0.8 GATA3 PIR47140 SLC44A2 ILF3-AS1 SMARCA4 DNM2 MIR638
GH19I010723 Enhancer 0.2 dbSUPER 550.8 -1.7 -1679 0.6 PIR47140 ILF3-AS1 DNM2 MIR638
GH19I010717 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.4 -6361 3.7 HDGF PKNOX1 FOXA2 ARNT ARID4B NEUROD1 SIN3A FEZF1 ZNF2 ZBTB7B DNM2 GC19P010718 MIR638 KRI1 EIF3G ILF3 FBXL12 RAVER1 TIMM29 PPAN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR47140 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47140 Gene

Genomic Locations for PIR47140 Gene
chr19:10,725,516-10,725,545
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr19:10,836,192-10,836,221
(GRCh37/hg19)

Genomic View for PIR47140 Gene

Genes around PIR47140 on UCSC Golden Path with GeneCards custom track

PIR47140 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47140 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47140 Gene

Proteins for PIR47140 Gene

Post-translational modifications for PIR47140 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR47140 Gene

Domains & Families for PIR47140 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR47140 Gene

Function for PIR47140 Gene

Phenotypes From GWAS Catalog for PIR47140 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47140 Gene

Localization for PIR47140 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47140 Gene

Pathways & Interactions for PIR47140 Gene

SuperPathways for PIR47140 Gene

No Data Available

Interacting Proteins for PIR47140 Gene

Gene Ontology (GO) - Biological Process for PIR47140 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47140 Gene

Drugs & Compounds for PIR47140 Gene

No Compound Related Data Available

Transcripts for PIR47140 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47140 Gene

No ASD Table

Relevant External Links for PIR47140 Gene

GeneLoc Exon Structure for
PIR47140

No data available for mRNA/cDNA for PIR47140 Gene

Expression for PIR47140 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47140 Gene

Orthologs for PIR47140 Gene

No data available for Orthologs and Evolution for PIR47140 Gene

Paralogs for PIR47140 Gene

No data available for Paralogs for PIR47140 Gene

Variants for PIR47140 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47140 Gene

Disorders for PIR47140 Gene

No disorders were found for PIR47140 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47140 Gene

Publications for PIR47140 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR47140 Gene

Sources for PIR47140 Gene

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