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Aliases for PIR47119 Gene

Subcategory (RNA class) for PIR47119 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR47119 Gene

No Aliases found

ORGUL Members for PIR47119 Gene

Previous GeneCards Identifiers for PIR47119 Gene

  • GC20M047768

No data available for External Ids for PIR47119 Gene

Summaries for PIR47119 Gene

GeneCards Summary for PIR47119 Gene

PIR47119 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47119 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR47119 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47119 Gene

Genomics for PIR47119 Gene

GeneHancer (GH) Regulatory Elements for PIR47119 Gene

Promoters and enhancers for PIR47119 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I049184 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE 0.3 -35.0 -34985 4.8 HDGF PKNOX1 FOXA2 SMAD1 MLX ARNT ZFP64 ARID4B SIN3A IRF4 STAU1 DDX27 CSE1L SNORD12B ARFGEF2 ZFAS1 PREX1 GC20M049182 PIR47119
GH20I049166 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 -15.7 -15733 2.4 PKNOX1 JUNB ELF1 BATF SKI ZGPAT NBN ATF7 ZNF24 BCL6 CSE1L PREX1 ZNFX1 PIR47119 STAU1
GH20I049179 Enhancer 1.1 Ensembl ENCODE 0.3 -28.3 -28319 1.4 PKNOX1 FOXA2 ARID4B YY1 ZNF121 ATF7 FOS RUNX3 RXRA MIER2 DDX27 CSE1L STAU1 PIR47119
GH20I049161 Enhancer 0.7 ENCODE 0.4 -10.1 -10090 1.3 DRAP1 ELF3 KLF1 FOXA2 SAP130 ZSCAN9 TEAD3 RFXANK IKZF2 MIXL1 CSE1L PIR47119 STAU1
GH20I049180 Enhancer 0.5 Ensembl 0.3 -29.3 -29262 0.2 SCRT2 INSM2 WT1 ZBTB12 DDX27 STAU1 PIR47119
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR47119 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47119 Gene

Genomic Locations for PIR47119 Gene
chr20:49,151,613-49,151,639
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr20:47,768,150-47,768,176
(GRCh37/hg19)

Genomic View for PIR47119 Gene

Genes around PIR47119 on UCSC Golden Path with GeneCards custom track

PIR47119 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47119 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47119 Gene

Proteins for PIR47119 Gene

Post-translational modifications for PIR47119 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR47119 Gene

Domains & Families for PIR47119 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR47119 Gene

Function for PIR47119 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47119 Gene

Localization for PIR47119 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47119 Gene

Pathways & Interactions for PIR47119 Gene

SuperPathways for PIR47119 Gene

No Data Available

Interacting Proteins for PIR47119 Gene

Gene Ontology (GO) - Biological Process for PIR47119 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47119 Gene

Drugs & Compounds for PIR47119 Gene

No Compound Related Data Available

Transcripts for PIR47119 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47119 Gene

No ASD Table

Relevant External Links for PIR47119 Gene

GeneLoc Exon Structure for
PIR47119

No data available for mRNA/cDNA for PIR47119 Gene

Expression for PIR47119 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47119 Gene

Orthologs for PIR47119 Gene

No data available for Orthologs and Evolution for PIR47119 Gene

Paralogs for PIR47119 Gene

No data available for Paralogs for PIR47119 Gene

Variants for PIR47119 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47119 Gene

Disorders for PIR47119 Gene

No disorders were found for PIR47119 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47119 Gene

Publications for PIR47119 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR47119 Gene

Sources for PIR47119 Gene

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