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Aliases for PIR47033 Gene

Subcategory (RNA class) for PIR47033 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR47033 Gene

No Aliases found

ORGUL Members for PIR47033 Gene

No data available for External Ids for PIR47033 Gene

Summaries for PIR47033 Gene

GeneCards Summary for PIR47033 Gene

PIR47033 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR47033 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR47033 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR47033 Gene

Genomics for PIR47033 Gene

GeneHancer (GH) Regulatory Elements for PIR47033 Gene

Promoters and enhancers for PIR47033 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J002113 Enhancer 0.5 ENCODE 0.4 +14.7 14697 0.2 ZBTB7A PRDM1 ZNF600 ZSCAN5A KLF17 KLF1 PIR47033 GC19P002129 AP3D1
GH19J002123 Enhancer 0.6 ENCODE 0.3 +24.5 24537 0.2 REST ZBTB26 EHMT2 SIN3A HIC1 ZNF143 MXD3 MIER2 AP3D1 BTBD2 MIR1227 SF3A2 GC19P002129 PIR47033
GH19J002112 Enhancer 0.3 ENCODE 0.4 +13.5 13514 0.4 HIC1 PIR47033 GC19P002129 AP3D1
GH19J002108 Enhancer 0.2 dbSUPER 0.4 +10.1 10087 2.2 AP3D1 PLEKHJ1 PIR47033 GC19P002129
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR47033 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR47033 Gene

Genomic Locations for PIR47033 Gene
chr19:2,099,320-2,099,349
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr19:2,099,319-2,099,348
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR47033 Gene

Genes around PIR47033 on UCSC Golden Path with GeneCards custom track

PIR47033 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR47033 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR47033 Gene

Proteins for PIR47033 Gene

Post-translational modifications for PIR47033 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR47033 Gene

Domains & Families for PIR47033 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR47033 Gene

Function for PIR47033 Gene

Phenotypes From GWAS Catalog for PIR47033 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR47033 Gene

Localization for PIR47033 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR47033 Gene

Pathways & Interactions for PIR47033 Gene

PathCards logo

SuperPathways for PIR47033 Gene

No Data Available

Interacting Proteins for PIR47033 Gene

Gene Ontology (GO) - Biological Process for PIR47033 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR47033 Gene

Drugs & Compounds for PIR47033 Gene

No Compound Related Data Available

Transcripts for PIR47033 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR47033 Gene

No ASD Table

Relevant External Links for PIR47033 Gene

GeneLoc Exon Structure for
PIR47033

No data available for mRNA/cDNA for PIR47033 Gene

Expression for PIR47033 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR47033 Gene

Orthologs for PIR47033 Gene

No data available for Orthologs and Evolution for PIR47033 Gene

Paralogs for PIR47033 Gene

No data available for Paralogs for PIR47033 Gene

Variants for PIR47033 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR47033 Gene

Disorders for PIR47033 Gene

No disorders were found for PIR47033 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR47033 Gene

Publications for PIR47033 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR47033 Gene

Products for PIR47033 Gene

Sources for PIR47033 Gene

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