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Aliases for PIR46918 Gene

Subcategory (RNA class) for PIR46918 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR46918 Gene

No Aliases found

ORGUL Members for PIR46918 Gene

Previous GeneCards Identifiers for PIR46918 Gene

  • GC12P002370

No data available for External Ids for PIR46918 Gene

Summaries for PIR46918 Gene

GeneCards Summary for PIR46918 Gene

PIR46918 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR46918 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR46918 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR46918 Gene

Genomics for PIR46918 Gene

GeneHancer (GH) Regulatory Elements for PIR46918 Gene

Promoters and enhancers for PIR46918 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J002259 Enhancer 0.6 ENCODE dbSUPER 600.7 -1.7 -1722 0.9 GABPA POLR2A PIR46918 CACNA1C-AS4 CACNA1C
GH12J002262 Enhancer 0.5 Ensembl dbSUPER 600.7 +0.9 900 0.6 SCRT2 PIR46918 CACNA1C-AS4 CACNA1C-IT3 CACNA1C
GH12J002256 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 -4.7 -4703 1.6 ZNF473 ZNF121 IKZF1 ZNF680 ZNF704 ZNF547 ZNF488 ZNF544 ZNF300 ZNF776 ITFG2 TULP3 DCP1B CBX3P4 IQSEC3P1 ENSG00000227081 CACNA1C-AS4 NRIP2 LINC00942 CACNA1C-IT3
GH12J002263 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.4 5366 6.7 SP1 POLR2A RXRA CEBPA FOXA2 JUND FOS YY1 ZBTB33 RCOR1 CACNA1C-AS4 CACNA1C-IT3 CACNA1C PIR46918
GH12J002243 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -13.5 -13522 9.4 ZNF652 SP1 ELF3 CEBPG RERE ZNF687 TFE3 SP7 HNF1A PPARG CACNA1C-AS4 ITFG2 DCP1B CACNA1C-IT3 CACNA1C PIR46918
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR46918 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR46918 Gene

Genomic Locations for PIR46918 Gene
chr12:2,261,401-2,261,427
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr12:2,370,567-2,370,593
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR46918 Gene

Genes around PIR46918 on UCSC Golden Path with GeneCards custom track

PIR46918 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR46918 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR46918 Gene

Proteins for PIR46918 Gene

Post-translational modifications for PIR46918 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR46918 Gene

Domains & Families for PIR46918 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR46918 Gene

Function for PIR46918 Gene

Phenotypes From GWAS Catalog for PIR46918 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR46918 Gene

Localization for PIR46918 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR46918 Gene

Pathways & Interactions for PIR46918 Gene

PathCards logo

SuperPathways for PIR46918 Gene

No Data Available

Interacting Proteins for PIR46918 Gene

Gene Ontology (GO) - Biological Process for PIR46918 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR46918 Gene

Drugs & Compounds for PIR46918 Gene

No Compound Related Data Available

Transcripts for PIR46918 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR46918 Gene

No ASD Table

Relevant External Links for PIR46918 Gene

GeneLoc Exon Structure for
PIR46918

No data available for mRNA/cDNA for PIR46918 Gene

Expression for PIR46918 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR46918 Gene

Orthologs for PIR46918 Gene

No data available for Orthologs and Evolution for PIR46918 Gene

Paralogs for PIR46918 Gene

No data available for Paralogs for PIR46918 Gene

Variants for PIR46918 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR46918 Gene

Disorders for PIR46918 Gene

No disorders were found for PIR46918 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR46918 Gene

Publications for PIR46918 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR46918 Gene

Products for PIR46918 Gene

Sources for PIR46918 Gene

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