Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR46844 Gene

Subcategory (RNA class) for PIR46844 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR46844 Gene

No Aliases found

ORGUL Members for PIR46844 Gene

Previous GeneCards Identifiers for PIR46844 Gene

  • GC05P179270

No data available for External Ids for PIR46844 Gene

Summaries for PIR46844 Gene

GeneCards Summary for PIR46844 Gene

PIR46844 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR46844 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR46844 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR46844 Gene

Genomics for PIR46844 Gene

GeneHancer (GH) Regulatory Elements for PIR46844 Gene

Promoters and enhancers for PIR46844 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I179839 Enhancer 0.9 ENCODE dbSUPER 550.8 -0.8 -796 0.9 KLF1 MAX SIN3A RAD21 POLR2A SCRT2 ZNF600 SCRT1 RXRA REST PIR46844 MRNIP TBC1D9B SQSTM1 MGAT4B MIR1229 LTC4S MAML1 PIR36293
GH05I179838 Enhancer 0.6 ENCODE dbSUPER 550.8 -1.7 -1701 0.2 POLR2A ZNF48 SUPT5H PIR46844 MRNIP LOC100996419 TBC1D9B SQSTM1 MGAT4B LTC4S MIR1229 MAML1 PIR36293
GH05I179840 Enhancer 0.5 ENCODE dbSUPER 550.8 -0.2 -221 0.2 POLR2A PIR46844 TBC1D9B PIR36293 MRNIP
GH05I179841 Enhancer 0.5 ENCODE dbSUPER 550.8 +0.0 26 0 POLR2A PIR46844 RN7SKP150 MRNIP
GH05I179836 Enhancer 1 ENCODE dbSUPER 0.8 -3.4 -3360 2 HDGF PKNOX1 SMAD1 SIN3A RAD21 ZNF48 ETS1 POLR2B E2F8 FOS PIR32850 PIR57524 PIR36293 MRNIP LOC100996419 TBC1D9B SQSTM1 MGAT4B MIR1229 LTC4S
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR46844 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR46844 Gene

Genomic Locations for PIR46844 Gene
chr5:179,840,557-179,840,584
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr5:179,267,557-179,267,584
(GRCh37/hg19)

Genomic View for PIR46844 Gene

Genes around PIR46844 on UCSC Golden Path with GeneCards custom track

PIR46844 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR46844 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR46844 Gene

Proteins for PIR46844 Gene

Post-translational modifications for PIR46844 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR46844 Gene

Domains & Families for PIR46844 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR46844 Gene

Function for PIR46844 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR46844 Gene

Localization for PIR46844 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR46844 Gene

Pathways & Interactions for PIR46844 Gene

SuperPathways for PIR46844 Gene

No Data Available

Interacting Proteins for PIR46844 Gene

Gene Ontology (GO) - Biological Process for PIR46844 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR46844 Gene

Drugs & Compounds for PIR46844 Gene

No Compound Related Data Available

Transcripts for PIR46844 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR46844 Gene

No ASD Table

Relevant External Links for PIR46844 Gene

GeneLoc Exon Structure for
PIR46844

No data available for mRNA/cDNA for PIR46844 Gene

Expression for PIR46844 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR46844 Gene

Orthologs for PIR46844 Gene

No data available for Orthologs and Evolution for PIR46844 Gene

Paralogs for PIR46844 Gene

No data available for Paralogs for PIR46844 Gene

Variants for PIR46844 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR46844 Gene

Disorders for PIR46844 Gene

No disorders were found for PIR46844 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR46844 Gene

Publications for PIR46844 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR46844 Gene

Sources for PIR46844 Gene

Content
Loading form....