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Aliases for PIR46739 Gene

Subcategory (RNA class) for PIR46739 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR46739 Gene

No Aliases found

ORGUL Members for PIR46739 Gene

Previous GeneCards Identifiers for PIR46739 Gene

  • GC06M031323
  • GC06M031330
  • GC06M031347
  • GC06M031361
  • GC06M031378
  • GC06M031384
  • GC06M031388
  • GC06M031390
  • GC06M031393
  • GC06M031397
  • GC06M031399
  • GC06M031405

No data available for External Ids for PIR46739 Gene

Summaries for PIR46739 Gene

GeneCards Summary for PIR46739 Gene

PIR46739 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR46739 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR46739 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR46739 Gene

Genomics for PIR46739 Gene

GeneHancer (GH) Regulatory Elements for PIR46739 Gene

Promoters and enhancers for PIR46739 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J031353 Enhancer 0.7 ENCODE dbSUPER 650.7 +2.0 1998 0.4 POLR2A CBFB NFATC1 ZBED1 PIR46739 HLA-C PSORS1C2 PSORS1C1 PSORS1C3 HCG27 HLA-B MICA CCHCR1 POU5F1
GH06J031352 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.2 -2237 7 HDGF PKNOX1 ATF1 SMAD1 ZNF2 IRF4 GLIS2 ZNF207 ZNF143 FOS HLA-B ENSG00000271581 GC06M031413 GC06M031414 MIR6891 PIR40863 HLA-C DDX39B MICA LY6G5B
GH06J031350 Enhancer 0.5 dbSUPER 0.7 +2.7 2748 0.7 PKNOX1 IKZF1 NFATC1 BACH1 HLA-C PSORS1C2 PSORS1C1 HCG27 HLA-B POU5F1 PIR46739 LINC02571
GH06J031351 Enhancer 0.5 ENCODE dbSUPER 0.7 +3.2 3216 0.1 IKZF1 PSORS1C2 PSORS1C1 HLA-C PSORS1C3 POU5F1 PIR46739 HLA-B LINC02571
GH06J031332 Enhancer 0.5 ENCODE 0.3 +20.9 20926 0.1 BCL11A NR2F1 JUNB ATF7 ATF2 RUNX3 CREM MICA-AS1 PSORS1C1 HLA-C HLA-B PIR46739 LINC02571
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR46739 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR46739 Gene

Genomic Locations for PIR46739 Gene
chr6:31,353,929-31,353,955
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr6:31,321,706-31,321,732
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR46739 Gene

Genes around PIR46739 on UCSC Golden Path with GeneCards custom track

PIR46739 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR46739 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR46739 Gene

Function for PIR46739 Gene

Phenotypes From GWAS Catalog for PIR46739 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR46739 Gene

Localization for PIR46739 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR46739 Gene

Pathways & Interactions for PIR46739 Gene

SuperPathways for PIR46739 Gene

No Data Available

Interacting Proteins for PIR46739 Gene

Gene Ontology (GO) - Biological Process for PIR46739 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR46739 Gene

Drugs & Compounds for PIR46739 Gene

No Compound Related Data Available

Transcripts for PIR46739 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR46739 Gene

No ASD Table

Relevant External Links for PIR46739 Gene

GeneLoc Exon Structure for
PIR46739

No data available for mRNA/cDNA for PIR46739 Gene

Expression for PIR46739 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR46739 Gene

Orthologs for PIR46739 Gene

No data available for Orthologs and Evolution for PIR46739 Gene

Paralogs for PIR46739 Gene

No data available for Paralogs for PIR46739 Gene

Variants for PIR46739 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR46739 Gene

Disorders for PIR46739 Gene

No disorders were found for PIR46739 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR46739 Gene

Publications for PIR46739 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR46739 Gene

Sources for PIR46739 Gene

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