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Aliases for PIR46708 Gene

Subcategory (RNA class) for PIR46708 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR46708 Gene

No Aliases found

ORGUL Members for PIR46708 Gene

Previous GeneCards Identifiers for PIR46708 Gene

  • GC04P002908

No data available for External Ids for PIR46708 Gene

Summaries for PIR46708 Gene

GeneCards Summary for PIR46708 Gene

PIR46708 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR46708 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR46708

Additional gene information for PIR46708 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR46708 Gene

Genomics for PIR46708 Gene

GeneHancer (GH) Regulatory Elements for PIR46708 Gene

Promoters and enhancers for PIR46708 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J002903 Enhancer 0.2 dbSUPER 650.7 -1.3 -1336 1 GC04P002904 PIR46708 NOP14-AS1 ADD1 TNIP2 GC04P002843 GC04P002844 GC04P002845
GH04J002930 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 +29.4 29362 8.2 HDGF PKNOX1 SMAD1 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 IRF4 NOP14-AS1 MFSD10 FAM193A GRK4 RNF4 NELFA HAUS3 HTT-AS HTT GC04P002904
GH04J002866 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 0.3 -37.1 -37135 3.4 ATF1 FOXA2 ARNT ARID4B YY1 TCF12 ZNF766 GATA2 E2F8 RXRA ADD1 GRK4 TNIP2 NOP14-AS1 MFSD10 NOP14 GC04P002844 GC04P002845 GC04P002843 PIR46708
GH04J002842 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.2 -60.4 -60350 3.8 HDGF PKNOX1 FOXA2 ZFP64 ARID4B SIN3A DMAP1 IRF4 POLR2B ZNF213 GC04P002845 GC04P002844 GC04P002843 ADD1 GRK4 FAM193A TNIP2 RNF4 PIR46708 GC04P002904
GH04J002857 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.3 -44.4 -44361 5.7 PKNOX1 FOXA2 ARID4B FEZF1 IRF4 YY1 TCF12 ZNF213 KLF7 RUNX3 GRK4 NOP14-AS1 NOP14 TNIP2 HTT GC04P002843 GC04P002844 GC04P002845 ADD1 PIR46708
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR46708 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR46708 Gene

Genomic Locations for PIR46708 Gene
chr4:2,904,840-2,904,870
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr4:2,906,567-2,906,597
(GRCh37/hg19)

Genomic View for PIR46708 Gene

Genes around PIR46708 on UCSC Golden Path with GeneCards custom track

PIR46708 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR46708 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR46708 Gene

ORGUL Member Location for PIR46708 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR46708 Gene

Function for PIR46708 Gene

Phenotypes From GWAS Catalog for PIR46708 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR46708 Gene

Localization for PIR46708 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR46708 Gene

Pathways & Interactions for PIR46708 Gene

SuperPathways for PIR46708 Gene

No Data Available

Interacting Proteins for PIR46708 Gene

Gene Ontology (GO) - Biological Process for PIR46708 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR46708 Gene

Drugs & Compounds for PIR46708 Gene

No Compound Related Data Available

Transcripts for PIR46708 Gene

fRNAdb Secondary structures for PIR46708 Gene

  • FR289196

Alternative Splicing Database (ASD) splice patterns (SP) for PIR46708 Gene

No ASD Table

Relevant External Links for PIR46708 Gene

GeneLoc Exon Structure for
PIR46708

No data available for mRNA/cDNA for PIR46708 Gene

Expression for PIR46708 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR46708 Gene

Orthologs for PIR46708 Gene

No data available for Orthologs and Evolution for PIR46708 Gene

Paralogs for PIR46708 Gene

No data available for Paralogs for PIR46708 Gene

Variants for PIR46708 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR46708 Gene

Disorders for PIR46708 Gene

No disorders were found for PIR46708 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR46708 Gene

Publications for PIR46708 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR46708 Gene

Sources for PIR46708 Gene

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