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Aliases for PIR46587 Gene

Subcategory (RNA class) for PIR46587 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR46587 Gene

No Aliases found

ORGUL Members for PIR46587 Gene

No data available for External Ids for PIR46587 Gene

Summaries for PIR46587 Gene

GeneCards Summary for PIR46587 Gene

PIR46587 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR46587 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR46587 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR46587 Gene

Genomics for PIR46587 Gene

GeneHancer (GH) Regulatory Elements for PIR46587 Gene

Promoters and enhancers for PIR46587 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I003663 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.1 9067 4.8 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A ZNF766 ZNF143 SP5 DLGAP1-AS1 PIR46587 LOC105371967 DLGAP1
GH18I003658 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.7 14731 3.6 SMAD1 ATF1 ZBTB40 POLR3A ATF7 CAVIN1 CEBPB JUNB USF2 HDAC8 TGIF1 LOC105371967 PIR46587 DLGAP1
GH18I003670 Enhancer 0.6 ENCODE dbSUPER 0.8 +3.8 3767 1.6 ZNF792 ZKSCAN8 IKZF1 PIR46587 LOC105371967 DLGAP1
GH18I003687 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 -14.3 -14255 2.7 NCOA3 HDAC1 TEAD4 ZSCAN4 ZNF266 SP1 GATA3 JUND ZNF766 POLR2A PIR46587 ENSG00000266513 DLGAP1
GH18I003703 Enhancer 1 Ensembl ENCODE 0.3 -28.8 -28766 1.2 HDAC1 HDGF ATF1 PKNOX1 RB1 ARNT BRCA1 RAD21 RFX5 ARID2 PIR46587 ENSG00000266513 DLGAP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR46587 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR46587 Gene

Genomic Locations for PIR46587 Gene
chr18:3,675,013-3,675,039
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr18:3,675,013-3,675,039
(GRCh37/hg19)

Genomic View for PIR46587 Gene

Genes around PIR46587 on UCSC Golden Path with GeneCards custom track

PIR46587 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR46587 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR46587 Gene

Proteins for PIR46587 Gene

Post-translational modifications for PIR46587 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR46587 Gene

Domains & Families for PIR46587 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR46587 Gene

Function for PIR46587 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR46587 Gene

Localization for PIR46587 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR46587 Gene

Pathways & Interactions for PIR46587 Gene

SuperPathways for PIR46587 Gene

No Data Available

Interacting Proteins for PIR46587 Gene

Gene Ontology (GO) - Biological Process for PIR46587 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR46587 Gene

Drugs & Compounds for PIR46587 Gene

No Compound Related Data Available

Transcripts for PIR46587 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR46587 Gene

No ASD Table

Relevant External Links for PIR46587 Gene

GeneLoc Exon Structure for
PIR46587

No data available for mRNA/cDNA for PIR46587 Gene

Expression for PIR46587 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR46587 Gene

Orthologs for PIR46587 Gene

No data available for Orthologs and Evolution for PIR46587 Gene

Paralogs for PIR46587 Gene

No data available for Paralogs for PIR46587 Gene

Variants for PIR46587 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR46587 Gene

Disorders for PIR46587 Gene

No disorders were found for PIR46587 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR46587 Gene

Publications for PIR46587 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR46587 Gene

Sources for PIR46587 Gene

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