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Aliases for PIR46410 Gene

Subcategory (RNA class) for PIR46410 Gene

piRNA

Quality Score for this RNA gene is

19.2

Aliases for PIR46410 Gene

No Aliases found

ORGUL Members for PIR46410 Gene

Previous GeneCards Identifiers for PIR46410 Gene

  • GC15P028563

No data available for External Ids for PIR46410 Gene

Summaries for PIR46410 Gene

GeneCards Summary for PIR46410 Gene

PIR46410 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR46410 Gene - the ORGUL cluster for this gene includes several descriptions:

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR46410

Additional gene information for PIR46410 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR46410 Gene

Genomics for PIR46410 Gene

GeneHancer (GH) Regulatory Elements for PIR46410 Gene

Promoters and enhancers for PIR46410 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J028320 Promoter 1.3 EPDnew Ensembl 0.4 +6.2 6248 2.2 ZNF366 ZNF398 ZFX PRDM1 HERC2 PIR46410
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR46410 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR46410 Gene

Genomic Locations for PIR46410 Gene
chr15:28,315,653-28,315,777
(GRCh38/hg38)
Size:
125 bases
Orientation:
Plus strand
chr15:28,560,799-28,560,923
(GRCh37/hg19)
Size:
125 bases
Orientation:
Plus strand

Genomic View for PIR46410 Gene

Genes around PIR46410 on UCSC Golden Path with GeneCards custom track

PIR46410 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR46410 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR46410 Gene

ORGUL Member Location for PIR46410 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR46410 Gene

Function for PIR46410 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR46410 Gene

Localization for PIR46410 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR46410 Gene

Pathways & Interactions for PIR46410 Gene

SuperPathways for PIR46410 Gene

No Data Available

Interacting Proteins for PIR46410 Gene

Gene Ontology (GO) - Biological Process for PIR46410 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR46410 Gene

Drugs & Compounds for PIR46410 Gene

No Compound Related Data Available

Transcripts for PIR46410 Gene

fRNAdb Secondary structures for PIR46410 Gene

  • FR052770
  • FR075141

Alternative Splicing Database (ASD) splice patterns (SP) for PIR46410 Gene

No ASD Table

Relevant External Links for PIR46410 Gene

GeneLoc Exon Structure for
PIR46410

No data available for mRNA/cDNA for PIR46410 Gene

Expression for PIR46410 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR46410 Gene

Orthologs for PIR46410 Gene

No data available for Orthologs and Evolution for PIR46410 Gene

Paralogs for PIR46410 Gene

No data available for Paralogs for PIR46410 Gene

Variants for PIR46410 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR46410 Gene

Disorders for PIR46410 Gene

No disorders were found for PIR46410 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR46410 Gene

Publications for PIR46410 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for PIR46410 Gene

Sources for PIR46410 Gene

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