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Aliases for PIR46258 Gene

Subcategory (RNA class) for PIR46258 Gene


Quality Score for this RNA gene is


Aliases for PIR46258 Gene

No Aliases found

ORGUL Members for PIR46258 Gene

Previous GeneCards Identifiers for PIR46258 Gene

  • GC22M039175

No data available for External Ids for PIR46258 Gene

Summaries for PIR46258 Gene

GeneCards Summary for PIR46258 Gene

PIR46258 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR46258 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR46258

Additional gene information for PIR46258 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR46258 Gene

Genomics for PIR46258 Gene

GeneHancer (GH) Regulatory Elements for PIR46258 Gene

Promoters and enhancers for PIR46258 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I038781 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 0.8 -3.8 -3779 1.8 HDAC1 HDGF PKNOX1 ATF1 ZSCAN4 EGR1 EGR2 SMARCA5 ZBTB2 ZNF398 DNAL4 TAB1 NPTXR PLA2G6 CBX7 ENSG00000228274 ENSG00000244627 GC22M042336 PIR46258 SUN2
GH22I038792 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.4 -14.8 -14774 1.9 PKNOX1 ATF1 ARID4B SIN3A KLF7 FOS SP3 CEBPZ NFYC REST DNAL4 SUN2 NPTXR MIEF1 ENSG00000244627 PIR46258 GC22M042336
GH22I038749 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +24.4 24449 9.7 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SUN2 FAM227A CBY1 ENSG00000228274 GTPBP1 DNAL4 MIEF1 JOSD1 APOBEC3G APOBEC3D
GH22I038784 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -8.2 -8216 5 ATF1 YY1 TCF12 GATA2 FOS ZNF592 MEF2D ATF4 ZNF585B SMARCA4 ENSG00000228274 NPTXR TAB1 CBY1 ANKRD54 ENSG00000273076 DNAL4 ENSG00000244627 APOBEC3H GC22M042336
GH22I038766 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +12.8 12815 0.2 HDGF ARID4B SIN3A FEZF1 ZNF48 ZNF143 FOS RXRA MIER2 KAT8 CBX6 NPTXR SYNGR1 POLR2F CBX7 GC22M042336 PIR46258 ENSG00000273076 SUN2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR46258 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR46258 Gene

Genomic Locations for PIR46258 Gene
32 bases
Minus strand

Genomic View for PIR46258 Gene

Genes around PIR46258 on UCSC Golden Path with GeneCards custom track

PIR46258 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR46258 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR46258 Gene

ORGUL Member Location for PIR46258 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR46258 Gene

Proteins for PIR46258 Gene

Post-translational modifications for PIR46258 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR46258 Gene

Domains & Families for PIR46258 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR46258 Gene

Function for PIR46258 Gene

Phenotypes From GWAS Catalog for PIR46258 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR46258 Gene

Localization for PIR46258 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR46258 Gene

Pathways & Interactions for PIR46258 Gene

SuperPathways for PIR46258 Gene

No Data Available

Interacting Proteins for PIR46258 Gene

Gene Ontology (GO) - Biological Process for PIR46258 Gene


No data available for Pathways by source and SIGNOR curated interactions for PIR46258 Gene

Drugs & Compounds for PIR46258 Gene

No Compound Related Data Available

Transcripts for PIR46258 Gene

fRNAdb Secondary structures for PIR46258 Gene

  • FR328281

Alternative Splicing Database (ASD) splice patterns (SP) for PIR46258 Gene

No ASD Table

Relevant External Links for PIR46258 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for PIR46258 Gene

Expression for PIR46258 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR46258 Gene

Orthologs for PIR46258 Gene

No data available for Orthologs and Evolution for PIR46258 Gene

Paralogs for PIR46258 Gene

No data available for Paralogs for PIR46258 Gene

Variants for PIR46258 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR46258 Gene

Disorders for PIR46258 Gene

No disorders were found for PIR46258 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR46258 Gene

Publications for PIR46258 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR46258 Gene

Sources for PIR46258 Gene

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