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Aliases for PIR45971 Gene

Subcategory (RNA class) for PIR45971 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR45971 Gene

No Aliases found

ORGUL Members for PIR45971 Gene

Previous GeneCards Identifiers for PIR45971 Gene

  • GC12P012047

No data available for External Ids for PIR45971 Gene

Summaries for PIR45971 Gene

GeneCards Summary for PIR45971 Gene

PIR45971 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45971 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR45971 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45971 Gene

Genomics for PIR45971 Gene

GeneHancer (GH) Regulatory Elements for PIR45971 Gene

Promoters and enhancers for PIR45971 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J011894 Enhancer 0.7 ENCODE dbSUPER 650.7 +0.6 638 1.6 POLR2A CBFB NR2F1 EED JUNB BATF RUNX3 PIR45971 GC12P012010 ETV6
GH12J011895 Enhancer 0.7 Ensembl dbSUPER 650.7 +1.6 1626 0.2 ZFHX2 POLR2A NR2F1 EGR2 PIR45971 GC12P012010
GH12J011883 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.0 -8961 3.3 ELF3 PKNOX1 FOXA2 RARA YY1 ELK1 FOS CREM RXRA ELF1 BCL2L14 ETV6 PIR45971 GC12M012306
GH12J011875 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.5 -16549 5.3 SRF PKNOX1 HLF JUNB MNT JUND SCRT2 IKZF1 ATF7 FOS ETV6 BCL2L14 PIR45971 GC12M012306
GH12J011897 Enhancer 0.7 dbSUPER 0.7 +4.1 4055 2.3 TEAD4 TAL1 TCF12 CTBP1 NCOR1 CBFA2T2 NFE2 TRIM24 SMARCE1 SOX6 PIR45971 GC12P012010
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45971 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45971 Gene

Genomic Locations for PIR45971 Gene
chr12:11,894,275-11,894,302
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr12:12,047,209-12,047,236
(GRCh37/hg19)

Genomic View for PIR45971 Gene

Genes around PIR45971 on UCSC Golden Path with GeneCards custom track

PIR45971 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45971 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45971 Gene

Function for PIR45971 Gene

Phenotypes From GWAS Catalog for PIR45971 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45971 Gene

Localization for PIR45971 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45971 Gene

Pathways & Interactions for PIR45971 Gene

SuperPathways for PIR45971 Gene

No Data Available

Interacting Proteins for PIR45971 Gene

Gene Ontology (GO) - Biological Process for PIR45971 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45971 Gene

Drugs & Compounds for PIR45971 Gene

No Compound Related Data Available

Transcripts for PIR45971 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45971 Gene

No ASD Table

Relevant External Links for PIR45971 Gene

GeneLoc Exon Structure for
PIR45971

No data available for mRNA/cDNA for PIR45971 Gene

Expression for PIR45971 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45971 Gene

Orthologs for PIR45971 Gene

No data available for Orthologs and Evolution for PIR45971 Gene

Paralogs for PIR45971 Gene

No data available for Paralogs for PIR45971 Gene

Variants for PIR45971 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45971 Gene

Disorders for PIR45971 Gene

No disorders were found for PIR45971 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45971 Gene

Publications for PIR45971 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45971 Gene

Sources for PIR45971 Gene

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