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Aliases for PIR45658 Gene

Subcategory (RNA class) for PIR45658 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR45658 Gene

No Aliases found

ORGUL Members for PIR45658 Gene

Previous GeneCards Identifiers for PIR45658 Gene

  • GC0XM135288

No data available for External Ids for PIR45658 Gene

Summaries for PIR45658 Gene

GeneCards Summary for PIR45658 Gene

PIR45658 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45658 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR45658 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45658 Gene

Genomics for PIR45658 Gene

GeneHancer (GH) Regulatory Elements for PIR45658 Gene

Promoters and enhancers for PIR45658 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ136202 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 650.7 +1.7 1685 5.1 PKNOX1 ARNT INSM2 FEZF1 BMI1 BRCA1 RFX5 ZNF366 SCRT2 RCOR1 FHL1 PIR45658
GH0XJ136209 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 -2.9 -2875 1 CTCF ZNF654 REST RAD21 SMC3 CREB1 ZNF600 PRDM4 MAP7D3 PIR34436 PIR45658 FHL1
GH0XJ136166 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +37.8 37768 5.8 PKNOX1 FEZF1 ZNF2 ZNF213 FOS KLF13 SP3 RXRA REST TSHZ1 FHL1 MAP7D3 PIR45658
GH0XJ136210 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 -4.0 -3968 0.9 ZFP69B ZNF692 GLIS1 PIR34436 MAP7D3 SLC9A6 PIR45658 FHL1
GH0XJ136192 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +13.5 13462 1.9 SP1 VEZF1 NFE2 HNF4A CT45A6 MAP7D3 FHL1 MMGT1 PIR45658
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45658 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45658 Gene

Genomic Locations for PIR45658 Gene
chrX:136,206,632-136,206,658
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chrX:135,288,791-135,288,817
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR45658 Gene

Genes around PIR45658 on UCSC Golden Path with GeneCards custom track

PIR45658 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45658 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45658 Gene

Function for PIR45658 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45658 Gene

Localization for PIR45658 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45658 Gene

Pathways & Interactions for PIR45658 Gene

SuperPathways for PIR45658 Gene

No Data Available

Interacting Proteins for PIR45658 Gene

Gene Ontology (GO) - Biological Process for PIR45658 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45658 Gene

Drugs & Compounds for PIR45658 Gene

No Compound Related Data Available

Transcripts for PIR45658 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45658 Gene

No ASD Table

Relevant External Links for PIR45658 Gene

GeneLoc Exon Structure for
PIR45658

No data available for mRNA/cDNA for PIR45658 Gene

Expression for PIR45658 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45658 Gene

Orthologs for PIR45658 Gene

No data available for Orthologs and Evolution for PIR45658 Gene

Paralogs for PIR45658 Gene

No data available for Paralogs for PIR45658 Gene

Variants for PIR45658 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45658 Gene

Disorders for PIR45658 Gene

No disorders were found for PIR45658 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45658 Gene

Publications for PIR45658 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45658 Gene

Sources for PIR45658 Gene

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