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Aliases for PIR45652 Gene

Subcategory (RNA class) for PIR45652 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR45652 Gene

No Aliases found

ORGUL Members for PIR45652 Gene

Previous GeneCards Identifiers for PIR45652 Gene

  • GC17P020190

No data available for External Ids for PIR45652 Gene

Summaries for PIR45652 Gene

GeneCards Summary for PIR45652 Gene

PIR45652 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45652 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR45652 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45652 Gene

Genomics for PIR45652 Gene

GeneHancer (GH) Regulatory Elements for PIR45652 Gene

Promoters and enhancers for PIR45652 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I020284 Enhancer 0.4 ENCODE dbSUPER 550.8 -1.9 -1887 0.9 PIR45652 AKAP10 LGALS9B RNU6-258P GC17P020238 PIR45840 ENSG00000263494 SPECC1
GH17I020286 Enhancer 0.2 dbSUPER 550.8 +0.0 31 1.1 PIR45652 RNU6-1057P ENSG00000263494 SPECC1
GH17I020281 Enhancer 0.6 Ensembl dbSUPER 0.8 -4.6 -4606 0.6 POLR2A ZNF449 NOS2P3 SPECC1 PIR45652 GC17P020238 PIR45840 ENSG00000263494
GH17I020266 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -19.2 -19214 1.3 MEIS2 MAZ L3MBTL2 FEZF1 NFIC PRDM6 ZNF366 IKZF1 GLIS1 ZNF341 AKAP10 RNU6-258P SPECC1 PIR45652 GC17P020238 PIR45840 ENSG00000263494
GH17I020285 Enhancer 0.4 ENCODE dbSUPER 0.8 -2.5 -2524 0.2 RNU6-258P PIR45652 GC17P020238 PIR45840 ENSG00000263494 SPECC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45652 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45652 Gene

Genomic Locations for PIR45652 Gene
chr17:20,286,707-20,286,735
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr17:20,190,020-20,190,048
(GRCh37/hg19)

Genomic View for PIR45652 Gene

Genes around PIR45652 on UCSC Golden Path with GeneCards custom track

PIR45652 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45652 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45652 Gene

Proteins for PIR45652 Gene

Post-translational modifications for PIR45652 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR45652 Gene

Domains & Families for PIR45652 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR45652 Gene

Function for PIR45652 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45652 Gene

Localization for PIR45652 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45652 Gene

Pathways & Interactions for PIR45652 Gene

SuperPathways for PIR45652 Gene

No Data Available

Interacting Proteins for PIR45652 Gene

Gene Ontology (GO) - Biological Process for PIR45652 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45652 Gene

Drugs & Compounds for PIR45652 Gene

No Compound Related Data Available

Transcripts for PIR45652 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45652 Gene

No ASD Table

Relevant External Links for PIR45652 Gene

GeneLoc Exon Structure for
PIR45652

No data available for mRNA/cDNA for PIR45652 Gene

Expression for PIR45652 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45652 Gene

Orthologs for PIR45652 Gene

No data available for Orthologs and Evolution for PIR45652 Gene

Paralogs for PIR45652 Gene

No data available for Paralogs for PIR45652 Gene

Variants for PIR45652 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45652 Gene

Disorders for PIR45652 Gene

No disorders were found for PIR45652 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45652 Gene

Publications for PIR45652 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45652 Gene

Sources for PIR45652 Gene

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