Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR45649 Gene

Subcategory (RNA class) for PIR45649 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR45649 Gene

No Aliases found

ORGUL Members for PIR45649 Gene

Previous GeneCards Identifiers for PIR45649 Gene

  • GC14M102710

No data available for External Ids for PIR45649 Gene

Summaries for PIR45649 Gene

GeneCards Summary for PIR45649 Gene

PIR45649 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45649 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR45649 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45649 Gene

Genomics for PIR45649 Gene

GeneHancer (GH) Regulatory Elements for PIR45649 Gene

Promoters and enhancers for PIR45649 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J102239 Promoter/Enhancer 1 EPDnew ENCODE dbSUPER 0.7 +3.4 3380 2.1 ZIC2 MOK GC14P103474 HSP90AA1 WDR20 ZNF839 PIR45649
GH14J102249 Enhancer 0.5 ENCODE 0.7 -4.5 -4525 0.2 HDAC2 IKZF1 CBFA2T3 DPF2 ZEB2 MOK WDR20 HSP90AA1 PIR45649 GC14P103472
GH14J102245 Enhancer 0.3 dbSUPER 0.7 -2.4 -2351 1 EGR2 MOK PIR45649 GC14P103472 GC14P103474
GH14J102248 Enhancer 0.4 ENCODE dbSUPER 0.4 -5.3 -5344 0.8 MOK WDR20 HSP90AA1 ZNF839 GC14P103472 PIR45649
GH14J102252 Enhancer 0.2 ENCODE 0.4 -9.5 -9547 0.8 GC14P103472 MOK HSP90AA1 WDR20 ZNF839 PIR45649
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45649 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45649 Gene

Genomic Locations for PIR45649 Gene
chr14:102,243,792-102,243,821
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr14:102,710,129-102,710,158
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR45649 Gene

Genes around PIR45649 on UCSC Golden Path with GeneCards custom track

PIR45649 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45649 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45649 Gene

Function for PIR45649 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45649 Gene

Localization for PIR45649 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45649 Gene

Pathways & Interactions for PIR45649 Gene

SuperPathways for PIR45649 Gene

No Data Available

Interacting Proteins for PIR45649 Gene

Gene Ontology (GO) - Biological Process for PIR45649 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45649 Gene

Drugs & Compounds for PIR45649 Gene

No Compound Related Data Available

Transcripts for PIR45649 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45649 Gene

No ASD Table

Relevant External Links for PIR45649 Gene

GeneLoc Exon Structure for
PIR45649

No data available for mRNA/cDNA for PIR45649 Gene

Expression for PIR45649 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45649 Gene

Orthologs for PIR45649 Gene

No data available for Orthologs and Evolution for PIR45649 Gene

Paralogs for PIR45649 Gene

No data available for Paralogs for PIR45649 Gene

Variants for PIR45649 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45649 Gene

Disorders for PIR45649 Gene

No disorders were found for PIR45649 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45649 Gene

Publications for PIR45649 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45649 Gene

Sources for PIR45649 Gene

Content
Loading form....