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Aliases for PIR45643 Gene

Subcategory (RNA class) for PIR45643 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR45643 Gene

No Aliases found

ORGUL Members for PIR45643 Gene

Previous GeneCards Identifiers for PIR45643 Gene

  • GC10M134527

No data available for External Ids for PIR45643 Gene

Summaries for PIR45643 Gene

GeneCards Summary for PIR45643 Gene

PIR45643 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45643 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR45643 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45643 Gene

Genomics for PIR45643 Gene

GeneHancer (GH) Regulatory Elements for PIR45643 Gene

Promoters and enhancers for PIR45643 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I132713 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 550.8 -0.5 -455 1.4 RING1 POLR2A EZH2 PIR45643 NKX6-2 TUBGCP2 KNDC1 ADGRA1 CFAP46 INPP5A
GH10I132699 Enhancer 1.1 ENCODE dbSUPER 0.4 +13.6 13595 1.8 PKNOX1 FEZF1 ZNF2 ZNF213 KLF7 TSHZ1 ZNF488 ZNF610 ZSCAN16 GLIS1 NKX6-2 PIR45643 INPP5A
GH10I132709 Enhancer 0.5 dbSUPER 0.8 +3.9 3948 1.7 HDGF ZFHX2 POLR2A ZEB2 ZEB1 EGR2 INPP5A PIR45643
GH10I132683 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +28.8 28840 2.6 ELF3 PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ARID2 FOS SP5 NKX6-2 INPP5A FUOM PIR45643
GH10I132626 Enhancer 1.7 VISTA FANTOM5 Ensembl ENCODE dbSUPER 0.2 +83.7 83674 7.1 BCOR KLF1 ATF1 TAL1 TCF12 GATA3 FOXK2 VEZF1 ZSCAN5C CHD2 INPP5A PAOX PIR45643
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45643 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45643 Gene

Genomic Locations for PIR45643 Gene
chr10:132,714,096-132,714,123
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr10:134,527,600-134,527,627
(GRCh37/hg19)

Genomic View for PIR45643 Gene

Genes around PIR45643 on UCSC Golden Path with GeneCards custom track

PIR45643 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45643 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45643 Gene

Proteins for PIR45643 Gene

Post-translational modifications for PIR45643 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR45643 Gene

Domains & Families for PIR45643 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR45643 Gene

Function for PIR45643 Gene

Phenotypes From GWAS Catalog for PIR45643 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45643 Gene

Localization for PIR45643 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45643 Gene

Pathways & Interactions for PIR45643 Gene

SuperPathways for PIR45643 Gene

No Data Available

Interacting Proteins for PIR45643 Gene

Gene Ontology (GO) - Biological Process for PIR45643 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45643 Gene

Drugs & Compounds for PIR45643 Gene

No Compound Related Data Available

Transcripts for PIR45643 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45643 Gene

No ASD Table

Relevant External Links for PIR45643 Gene

GeneLoc Exon Structure for
PIR45643

No data available for mRNA/cDNA for PIR45643 Gene

Expression for PIR45643 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45643 Gene

Orthologs for PIR45643 Gene

No data available for Orthologs and Evolution for PIR45643 Gene

Paralogs for PIR45643 Gene

No data available for Paralogs for PIR45643 Gene

Variants for PIR45643 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45643 Gene

Disorders for PIR45643 Gene

No disorders were found for PIR45643 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45643 Gene

Publications for PIR45643 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45643 Gene

Sources for PIR45643 Gene

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