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Aliases for PIR45617 Gene

Subcategory (RNA class) for PIR45617 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR45617 Gene

No Aliases found

ORGUL Members for PIR45617 Gene

Previous GeneCards Identifiers for PIR45617 Gene

  • GC08M145229

No data available for External Ids for PIR45617 Gene

Summaries for PIR45617 Gene

GeneCards Summary for PIR45617 Gene

PIR45617 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45617 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR45617 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45617 Gene

Genomics for PIR45617 Gene

GeneHancer (GH) Regulatory Elements for PIR45617 Gene

Promoters and enhancers for PIR45617 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J144184 Enhancer 0.8 Ensembl ENCODE 0.4 -10.2 -10203 1.4 HDGF PKNOX1 NR2F1 DPF2 RELA ARID3A TARDBP IKZF1 NBN CTBP2 ZC3H3 BOP1 HSF1 ENSG00000254690 DGAT1 WDR97 ZNF251 ENSG00000255224 PIR45617 MROH1
GH08J144180 Enhancer 0.7 VISTA ENCODE 0.4 -6.3 -6340 1.7 ZNF148 VEZF1 KDM1A ZBTB33 CHD2 BOP1 HSF1 ENSG00000254690 DGAT1 ZNF251 WDR97 PIR45617 MROH1 MIR7112
GH08J144203 Enhancer 0.7 ENCODE 0.3 -28.3 -28333 0.2 ZNF282 CTCF RB1 MTA2 ZNF740 ARNT NRF1 BACH1 SIN3A REST PIR45617 MROH1 MIR7112
GH08J144178 Enhancer 0.2 ENCODE 0.7 -3.9 -3936 0.5 BOP1 HSF1 ENSG00000254690 DGAT1 WDR97 PIR45617 MROH1 MIR7112
GH08J144233 Enhancer 0.7 ENCODE 0.2 -58.7 -58663 0.2 HDGF HDAC1 CTCF CEBPG RAD21 ZNF207 ZNF143 SMC3 ZNF444 AFF1 ZNF251 MIR7112 PIR45617 MROH1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45617 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45617 Gene

Genomic Locations for PIR45617 Gene
chr8:144,175,091-144,175,120
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr8:145,229,994-145,230,023
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR45617 Gene

Genes around PIR45617 on UCSC Golden Path with GeneCards custom track

PIR45617 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45617 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45617 Gene

Function for PIR45617 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45617 Gene

Localization for PIR45617 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45617 Gene

Pathways & Interactions for PIR45617 Gene

SuperPathways for PIR45617 Gene

No Data Available

Interacting Proteins for PIR45617 Gene

Gene Ontology (GO) - Biological Process for PIR45617 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45617 Gene

Drugs & Compounds for PIR45617 Gene

No Compound Related Data Available

Transcripts for PIR45617 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45617 Gene

No ASD Table

Relevant External Links for PIR45617 Gene

GeneLoc Exon Structure for
PIR45617

No data available for mRNA/cDNA for PIR45617 Gene

Expression for PIR45617 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45617 Gene

Orthologs for PIR45617 Gene

No data available for Orthologs and Evolution for PIR45617 Gene

Paralogs for PIR45617 Gene

No data available for Paralogs for PIR45617 Gene

Variants for PIR45617 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45617 Gene

Disorders for PIR45617 Gene

No disorders were found for PIR45617 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45617 Gene

Publications for PIR45617 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45617 Gene

Sources for PIR45617 Gene

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