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Aliases for PIR45613 Gene

Subcategory (RNA class) for PIR45613 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR45613 Gene

No Aliases found

ORGUL Members for PIR45613 Gene

Previous GeneCards Identifiers for PIR45613 Gene

  • GC0XM117398

No data available for External Ids for PIR45613 Gene

Summaries for PIR45613 Gene

GeneCards Summary for PIR45613 Gene

PIR45613 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45613 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR45613 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45613 Gene

Genomics for PIR45613 Gene

GeneHancer (GH) Regulatory Elements for PIR45613 Gene

Promoters and enhancers for PIR45613 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ118271 Enhancer 0.9 ENCODE dbSUPER 0.4 -7.5 -7546 0.5 MEIS2 TEAD4 TAL1 CEBPG TCF12 POLR2A NCOR1 CBFA2T2 NFE2 TRIM24 ENSG00000270619 PIR45613
GH0XJ118260 Enhancer 0.4 ENCODE dbSUPER 0.7 +3.2 3156 1.1 WDR44 PIR45613 RPL12P43
GH0XJ118224 Enhancer 0.9 Ensembl ENCODE 0.3 +38.8 38811 1.5 CTCF PKNOX1 JUN ZSCAN4 MAX EBF1 RAD21 SMC3 ZNF143 RCOR1 KLHL13 PIR45613 RPL12P43
GH0XJ118238 Enhancer 0.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +24.6 24581 3.6 KLHL13 PIR45613 RPL12P43
GH0XJ118249 Enhancer 0.5 ENCODE dbSUPER 0.4 +13.4 13374 3.4 ZNF680 PIR45613 RPL12P43
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45613 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45613 Gene

Genomic Locations for PIR45613 Gene
chrX:118,264,401-118,264,427
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chrX:117,398,364-117,398,390
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR45613 Gene

Genes around PIR45613 on UCSC Golden Path with GeneCards custom track

PIR45613 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45613 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45613 Gene

Function for PIR45613 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45613 Gene

Localization for PIR45613 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45613 Gene

Pathways & Interactions for PIR45613 Gene

SuperPathways for PIR45613 Gene

No Data Available

Interacting Proteins for PIR45613 Gene

Gene Ontology (GO) - Biological Process for PIR45613 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45613 Gene

Drugs & Compounds for PIR45613 Gene

No Compound Related Data Available

Transcripts for PIR45613 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45613 Gene

No ASD Table

Relevant External Links for PIR45613 Gene

GeneLoc Exon Structure for
PIR45613

No data available for mRNA/cDNA for PIR45613 Gene

Expression for PIR45613 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45613 Gene

Orthologs for PIR45613 Gene

No data available for Orthologs and Evolution for PIR45613 Gene

Paralogs for PIR45613 Gene

No data available for Paralogs for PIR45613 Gene

Variants for PIR45613 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45613 Gene

Disorders for PIR45613 Gene

No disorders were found for PIR45613 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45613 Gene

Publications for PIR45613 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45613 Gene

Sources for PIR45613 Gene

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