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Aliases for PIR45473 Gene

Subcategory (RNA class) for PIR45473 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR45473 Gene

No Aliases found

ORGUL Members for PIR45473 Gene

Previous GeneCards Identifiers for PIR45473 Gene

  • GC06P034113
  • GC06P034616
  • GC06P035973
  • GC06P036511
  • GC06P037546
  • GC06P035146
  • GC06P036806
  • GC06P038033
  • GC06P038665
  • GC06P039268
  • GC06P039828
  • GC06P040788

No data available for External Ids for PIR45473 Gene

Summaries for PIR45473 Gene

GeneCards Summary for PIR45473 Gene

PIR45473 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45473 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR45473

Additional gene information for PIR45473 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45473 Gene

Genomics for PIR45473 Gene

GeneHancer (GH) Regulatory Elements for PIR45473 Gene

Promoters and enhancers for PIR45473 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I033903 Enhancer 1.4 FANTOM5 Ensembl ENCODE 550.8 -0.9 -879 4.2 FOXA2 PKNOX1 ARNT YY1 TCF12 GATA2 ATF7 RUNX3 RXRA NCOA1 GC06P041770 GC06P041777 GC06P041778 GC06P041786 GC06P041789 GC06P041803 GC06P041806 GC06P041807 GC06P041808 GC06P041814
GH06I033908 Enhancer 0.7 ENCODE 550.8 +1.6 1582 0.2 FOXA2 RXRA TAF1 MAX REST RAD21 RARA GABPA YY1 HNF1A GC06P041769 GC06P041770 GC06P041773 GC06P041777 GC06P041784 GC06P041799 GC06P041813 GC06P041817 GC06P041834 GC06P041842
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45473 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45473 Gene

Genomic Locations for PIR45473 Gene
chr6:33,906,537-33,906,568
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand
chr6:33,874,314-33,874,345
(GRCh37/hg19)

Genomic View for PIR45473 Gene

Genes around PIR45473 on UCSC Golden Path with GeneCards custom track

PIR45473 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45473 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR45473 Gene

ORGUL Member Location for PIR45473 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45473 Gene

Proteins for PIR45473 Gene

Post-translational modifications for PIR45473 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR45473 Gene

Domains & Families for PIR45473 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR45473 Gene

Function for PIR45473 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45473 Gene

Localization for PIR45473 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45473 Gene

Pathways & Interactions for PIR45473 Gene

SuperPathways for PIR45473 Gene

No Data Available

Interacting Proteins for PIR45473 Gene

Gene Ontology (GO) - Biological Process for PIR45473 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45473 Gene

Drugs & Compounds for PIR45473 Gene

No Compound Related Data Available

Transcripts for PIR45473 Gene

fRNAdb Secondary structures for PIR45473 Gene

  • FR229334

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45473 Gene

No ASD Table

Relevant External Links for PIR45473 Gene

GeneLoc Exon Structure for
PIR45473

No data available for mRNA/cDNA for PIR45473 Gene

Expression for PIR45473 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45473 Gene

Orthologs for PIR45473 Gene

No data available for Orthologs and Evolution for PIR45473 Gene

Paralogs for PIR45473 Gene

No data available for Paralogs for PIR45473 Gene

Variants for PIR45473 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45473 Gene

Disorders for PIR45473 Gene

No disorders were found for PIR45473 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45473 Gene

Publications for PIR45473 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45473 Gene

Sources for PIR45473 Gene

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