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Aliases for PIR45472 Gene

Subcategory (RNA class) for PIR45472 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR45472 Gene

No Aliases found

ORGUL Members for PIR45472 Gene

Previous GeneCards Identifiers for PIR45472 Gene

  • GC03M049167

No data available for External Ids for PIR45472 Gene

Summaries for PIR45472 Gene

GeneCards Summary for PIR45472 Gene

PIR45472 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45472 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR45472

Additional gene information for PIR45472 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45472 Gene

Genomics for PIR45472 Gene

GeneHancer (GH) Regulatory Elements for PIR45472 Gene

Promoters and enhancers for PIR45472 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I049131 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.8 -2.9 -2899 3.3 ARID4B SIN3A DMAP1 ZNF48 GLIS2 KLF7 RUNX3 SP3 RXRA MXD4 LAMB2 GC03M049129 PIR45472
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45472 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45472 Gene

Genomic Locations for PIR45472 Gene
chr3:49,129,868-49,129,899
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand
chr3:49,167,301-49,167,332
(GRCh37/hg19)

Genomic View for PIR45472 Gene

Genes around PIR45472 on UCSC Golden Path with GeneCards custom track

PIR45472 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45472 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR45472 Gene

ORGUL Member Location for PIR45472 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45472 Gene

Proteins for PIR45472 Gene

Post-translational modifications for PIR45472 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR45472 Gene

Domains & Families for PIR45472 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR45472 Gene

Function for PIR45472 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45472 Gene

Localization for PIR45472 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45472 Gene

Pathways & Interactions for PIR45472 Gene

SuperPathways for PIR45472 Gene

No Data Available

Interacting Proteins for PIR45472 Gene

Gene Ontology (GO) - Biological Process for PIR45472 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45472 Gene

Drugs & Compounds for PIR45472 Gene

No Compound Related Data Available

Transcripts for PIR45472 Gene

fRNAdb Secondary structures for PIR45472 Gene

  • FR013541

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45472 Gene

No ASD Table

Relevant External Links for PIR45472 Gene

GeneLoc Exon Structure for
PIR45472

No data available for mRNA/cDNA for PIR45472 Gene

Expression for PIR45472 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45472 Gene

Orthologs for PIR45472 Gene

No data available for Orthologs and Evolution for PIR45472 Gene

Paralogs for PIR45472 Gene

No data available for Paralogs for PIR45472 Gene

Variants for PIR45472 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45472 Gene

Disorders for PIR45472 Gene

No disorders were found for PIR45472 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45472 Gene

Publications for PIR45472 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45472 Gene

Sources for PIR45472 Gene

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