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Aliases for PIR45449 Gene

Subcategory (RNA class) for PIR45449 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR45449 Gene

No Aliases found

ORGUL Members for PIR45449 Gene

Previous GeneCards Identifiers for PIR45449 Gene

  • GC06P151674

No data available for External Ids for PIR45449 Gene

Summaries for PIR45449 Gene

GeneCards Summary for PIR45449 Gene

PIR45449 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45449 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR45449

Additional gene information for PIR45449 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45449 Gene

Genomics for PIR45449 Gene

GeneHancer (GH) Regulatory Elements for PIR45449 Gene

Promoters and enhancers for PIR45449 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J151323 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.3 -27.6 -27649 4.4 FOXA2 ARID4B DMAP1 ZNF2 ZNF48 GTF3C2 GLIS2 ARID2 ZNF143 RUNX3 AKAP12 HSPA8P15 ZBTB2 ENSG00000232290 RMND1 RN7SKP268 PIR45449 GC06P151355
GH06J151358 Enhancer 0.8 ENCODE 0.7 +4.9 4947 0.2 INSM2 MZF1 FEZF1 ZNF2 ZNF213 ZNF366 ZSCAN5C KLF7 OVOL3 ZNF398 GC06P151355 PIR45449 GC06M151379 ENSG00000252615 AKAP12
GH06J151373 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +21.1 21138 2.7 PKNOX1 SMAD1 ZNF280A POLR2B ZNF213 ARID2 ZFP91 RXRA SP5 NCOA1 AKAP12 RMND1 ENSG00000252615 GC06M151379 ZBTB2 PIR45449 GC06P151355
GH06J151334 Enhancer 0.9 Ensembl ENCODE 0.4 -18.2 -18226 0.8 CTCF ERF BMI1 ZNF2 RAD21 TEAD3 ZNF335 CC2D1A ARID2 ZNF143 RMND1 GC06P151355 PIR45449 RN7SKP268 AKAP12
GH06J151339 Enhancer 0.6 ENCODE 0.4 -13.9 -13893 0.2 MEIS2 TAL1 CBFA2T3 MITF TCF12 NFIC NCOR1 HDAC2 POLR2A CBFA2T2 GC06P151355 PIR45449 RN7SKP268 AKAP12
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45449 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45449 Gene

Genomic Locations for PIR45449 Gene
chr6:151,353,414-151,353,445
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand
chr6:151,674,549-151,674,580
(GRCh37/hg19)
Size:
32 bases
Orientation:
Plus strand

Genomic View for PIR45449 Gene

Genes around PIR45449 on UCSC Golden Path with GeneCards custom track

PIR45449 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45449 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR45449 Gene

ORGUL Member Location for PIR45449 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45449 Gene

Function for PIR45449 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45449 Gene

Localization for PIR45449 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45449 Gene

Pathways & Interactions for PIR45449 Gene

SuperPathways for PIR45449 Gene

No Data Available

Interacting Proteins for PIR45449 Gene

Gene Ontology (GO) - Biological Process for PIR45449 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45449 Gene

Drugs & Compounds for PIR45449 Gene

No Compound Related Data Available

Transcripts for PIR45449 Gene

fRNAdb Secondary structures for PIR45449 Gene

  • FR002100

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45449 Gene

No ASD Table

Relevant External Links for PIR45449 Gene

GeneLoc Exon Structure for
PIR45449

No data available for mRNA/cDNA for PIR45449 Gene

Expression for PIR45449 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45449 Gene

Orthologs for PIR45449 Gene

No data available for Orthologs and Evolution for PIR45449 Gene

Paralogs for PIR45449 Gene

No data available for Paralogs for PIR45449 Gene

Variants for PIR45449 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45449 Gene

Disorders for PIR45449 Gene

No disorders were found for PIR45449 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45449 Gene

Publications for PIR45449 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45449 Gene

Sources for PIR45449 Gene

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