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Aliases for PIR45430 Gene

Subcategory (RNA class) for PIR45430 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR45430 Gene

No Aliases found

ORGUL Members for PIR45430 Gene

Previous GeneCards Identifiers for PIR45430 Gene

  • GC01M094278

No data available for External Ids for PIR45430 Gene

Summaries for PIR45430 Gene

GeneCards Summary for PIR45430 Gene

PIR45430 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45430 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR45430 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45430 Gene

Genomics for PIR45430 Gene

GeneHancer (GH) Regulatory Elements for PIR45430 Gene

Promoters and enhancers for PIR45430 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I093811 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.8 -2.5 -2501 8 PKNOX1 ARID4B SIN3A FEZF1 ZNF2 IRF4 ZNF48 TCF12 ARID2 ZNF207 GC01P093813 MIG7 MIR760 BCAR3 GCLM TRR-TCT1-1 PIR45430 GC01M093831
GH01I093810 Enhancer 0.5 ENCODE dbSUPER 0.8 +2.1 2092 0.6 JUND MIG7 TRR-TCT1-1 GCLM PIR45430 GC01M093783 BCAR3
GH01I093803 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +7.9 7922 3.1 STAT1 JUN MAX EP300 SP1 FOSL1 GATA3 JUND POLR2A FOS GCLM TRR-TCT1-1 MIG7 GC01M093783 PIR45430 BCAR3
GH01I093801 Enhancer 0.9 ENCODE dbSUPER 0.4 +11.0 11013 0.2 SOX13 TFAP4 FOXA2 SAP130 CEBPG ZNF644 RAD21 RARA CREM HOMEZ GC01M093783 PIR45430 BCAR3
GH01I093797 Enhancer 0.7 ENCODE dbSUPER 0.4 +14.1 14088 1.6 MAFF JUND POLR2A JUN CEBPB SP7 GC01M093783 BCAR3 MIR760 TRR-TCT1-1 GCLM PIR45430
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45430 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45430 Gene

Genomic Locations for PIR45430 Gene
chr1:93,812,587-93,812,613
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr1:94,278,143-94,278,169
(GRCh37/hg19)

Genomic View for PIR45430 Gene

Genes around PIR45430 on UCSC Golden Path with GeneCards custom track

PIR45430 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45430 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45430 Gene

Proteins for PIR45430 Gene

Post-translational modifications for PIR45430 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR45430 Gene

Domains & Families for PIR45430 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR45430 Gene

Function for PIR45430 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45430 Gene

Localization for PIR45430 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45430 Gene

Pathways & Interactions for PIR45430 Gene

SuperPathways for PIR45430 Gene

No Data Available

Interacting Proteins for PIR45430 Gene

Gene Ontology (GO) - Biological Process for PIR45430 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45430 Gene

Drugs & Compounds for PIR45430 Gene

No Compound Related Data Available

Transcripts for PIR45430 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45430 Gene

No ASD Table

Relevant External Links for PIR45430 Gene

GeneLoc Exon Structure for
PIR45430

No data available for mRNA/cDNA for PIR45430 Gene

Expression for PIR45430 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45430 Gene

Orthologs for PIR45430 Gene

No data available for Orthologs and Evolution for PIR45430 Gene

Paralogs for PIR45430 Gene

No data available for Paralogs for PIR45430 Gene

Variants for PIR45430 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45430 Gene

Disorders for PIR45430 Gene

No disorders were found for PIR45430 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45430 Gene

Publications for PIR45430 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45430 Gene

Sources for PIR45430 Gene

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