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Aliases for PIR45405 Gene

Subcategory (RNA class) for PIR45405 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR45405 Gene

No Aliases found

ORGUL Members for PIR45405 Gene

Previous GeneCards Identifiers for PIR45405 Gene

  • GC05M171761

No data available for External Ids for PIR45405 Gene

Summaries for PIR45405 Gene

GeneCards Summary for PIR45405 Gene

PIR45405 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45405 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR45405 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45405 Gene

Genomics for PIR45405 Gene

GeneHancer (GH) Regulatory Elements for PIR45405 Gene

Promoters and enhancers for PIR45405 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J172313 Enhancer 0.9 Ensembl ENCODE 0.4 +19.7 19682 3.5 KLF1 STAT5A ZNF384 EBF1 BATF IRF4 RELA POLR2A NFATC1 EED GC05M172289 PIR45405
GH05J172320 Enhancer 0.6 Ensembl 0.4 +14.6 14578 0.5 HDGF ZBED1 JUNB EBF1 MEF2B BATF IRF4 BCL11A IKZF1 ZNF24 UBTD2 PIR45405 GC05M172289
GH05J172303 Enhancer 0.8 ENCODE 0.3 +31.0 30997 0.2 ZBTB21 JUN SREBF2 ZNF324 ZNF335 ZNF664 GATA3 ZNF366 POLR3A ZNF143 UBTD2 SH3PXD2B GC05M172289 PIR45405
GH05J172304 Enhancer 0.5 ENCODE 0.3 +31.6 31600 0.2 ZNF335 CUX1 ZNF384 RFX5 GC05M172289 PIR45405
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR45405 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45405 Gene

Genomic Locations for PIR45405 Gene
chr5:172,334,804-172,334,832
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr5:171,761,808-171,761,836
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR45405 Gene

Genes around PIR45405 on UCSC Golden Path with GeneCards custom track

PIR45405 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45405 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45405 Gene

Function for PIR45405 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45405 Gene

Localization for PIR45405 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45405 Gene

Pathways & Interactions for PIR45405 Gene

SuperPathways for PIR45405 Gene

No Data Available

Interacting Proteins for PIR45405 Gene

Gene Ontology (GO) - Biological Process for PIR45405 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45405 Gene

Drugs & Compounds for PIR45405 Gene

No Compound Related Data Available

Transcripts for PIR45405 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45405 Gene

No ASD Table

Relevant External Links for PIR45405 Gene

GeneLoc Exon Structure for
PIR45405

No data available for mRNA/cDNA for PIR45405 Gene

Expression for PIR45405 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45405 Gene

Orthologs for PIR45405 Gene

No data available for Orthologs and Evolution for PIR45405 Gene

Paralogs for PIR45405 Gene

No data available for Paralogs for PIR45405 Gene

Variants for PIR45405 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45405 Gene

Disorders for PIR45405 Gene

No disorders were found for PIR45405 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45405 Gene

Publications for PIR45405 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45405 Gene

Sources for PIR45405 Gene

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