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Aliases for PIR45397 Gene

Subcategory (RNA class) for PIR45397 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR45397 Gene

No Aliases found

ORGUL Members for PIR45397 Gene

Previous GeneCards Identifiers for PIR45397 Gene

  • GC02P111582
  • GC02P111781
  • GC02P112128
  • GC02P112333
  • GC02P112609
  • GC02P110840
  • GC02P111024
  • GC02P111253
  • GC02P111838
  • GC02P112704
  • GC02P112971
  • GC02P113194
  • GC02P113431

No data available for External Ids for PIR45397 Gene

Summaries for PIR45397 Gene

GeneCards Summary for PIR45397 Gene

PIR45397 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45397 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR45397

Additional gene information for PIR45397 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45397 Gene

Genomics for PIR45397 Gene

GeneHancer (GH) Regulatory Elements for PIR45397 Gene

Promoters and enhancers for PIR45397 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J110712 Enhancer 0.6 ENCODE 650.7 -0.5 -496 2.1 ESRRA CBFA2T3 ZEB2 FOSL1 JUND SCRT2 CBFA2T2 FOS FOSL2 GC02P113771 GC02P113776 GC02P113787 GC02P113827 GC02P113861 PIR39864 PIR40862 PIR57558 PIR41834 PIR49793
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR45397 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45397 Gene

Genomic Locations for PIR45397 Gene
chr2:110,713,883-110,713,914
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand
chr2:111,471,460-111,471,491
(GRCh37/hg19)
Size:
32 bases
Orientation:
Plus strand

Genomic View for PIR45397 Gene

Genes around PIR45397 on UCSC Golden Path with GeneCards custom track

PIR45397 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45397 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR45397 Gene

ORGUL Member Location for PIR45397 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45397 Gene

Function for PIR45397 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45397 Gene

Localization for PIR45397 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45397 Gene

Pathways & Interactions for PIR45397 Gene

SuperPathways for PIR45397 Gene

No Data Available

Interacting Proteins for PIR45397 Gene

Gene Ontology (GO) - Biological Process for PIR45397 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45397 Gene

Drugs & Compounds for PIR45397 Gene

No Compound Related Data Available

Transcripts for PIR45397 Gene

fRNAdb Secondary structures for PIR45397 Gene

  • FR047031

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45397 Gene

No ASD Table

Relevant External Links for PIR45397 Gene

GeneLoc Exon Structure for
PIR45397

No data available for mRNA/cDNA for PIR45397 Gene

Expression for PIR45397 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45397 Gene

Orthologs for PIR45397 Gene

No data available for Orthologs and Evolution for PIR45397 Gene

Paralogs for PIR45397 Gene

No data available for Paralogs for PIR45397 Gene

Variants for PIR45397 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45397 Gene

Disorders for PIR45397 Gene

No disorders were found for PIR45397 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45397 Gene

Publications for PIR45397 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45397 Gene

Sources for PIR45397 Gene

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