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Aliases for PIR45248 Gene

Subcategory (RNA class) for PIR45248 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR45248 Gene

No Aliases found

ORGUL Members for PIR45248 Gene

Previous GeneCards Identifiers for PIR45248 Gene

  • GC06P037247
  • GC06P037848
  • GC06P037854
  • GC06P038429
  • GC06P039020
  • GC06P039607
  • GC06P040168

No data available for External Ids for PIR45248 Gene

Summaries for PIR45248 Gene

GeneCards Summary for PIR45248 Gene

PIR45248 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45248 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR45248 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45248 Gene

Genomics for PIR45248 Gene

GeneHancer (GH) Regulatory Elements for PIR45248 Gene

Promoters and enhancers for PIR45248 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I037279 Enhancer 0.8 ENCODE dbSUPER 550.8 +0.4 425 0.2 RXRA CEBPB MAX REST RAD21 GABPA YY1 JUND POLR2A ATF3 PIR45248 TBC1D22B RNF8 FGD2 ENSG00000275550
GH06I037278 Enhancer 0.4 ENCODE dbSUPER 550.8 -0.9 -860 0.2 PIR45248 TBC1D22B RNF8 FGD2 TMEM217
GH06I037282 Enhancer 0.8 ENCODE dbSUPER 0.8 +4.1 4118 1.8 RXRA MAX REST RAD21 FOXA1 YY1 JUND ZSCAN16 ATF3 HNF4G TMEM217 TBC1D22B RNF8 MTCH1 FGD2 PIR45248 ENSG00000275550
GH06I037262 Enhancer 0.8 ENCODE dbSUPER 0.4 -16.8 -16775 0.2 SCRT1 FOXA2 MAX REST YY1 FOXA1 JUND GATA3 SCRT2 HNF4A TMEM217 TBC1D22B PIR45248 GC06P042411
GH06I037289 Enhancer 0.6 ENCODE dbSUPER 0.4 +10.5 10458 1.2 CTBP1 EBF1 RUNX3 TBC1D22B ENSG00000275550 PIR45248
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45248 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45248 Gene

Genomic Locations for PIR45248 Gene
chr6:37,279,555-37,279,581
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr6:37,247,331-37,247,357
(GRCh37/hg19)

Genomic View for PIR45248 Gene

Genes around PIR45248 on UCSC Golden Path with GeneCards custom track

PIR45248 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45248 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45248 Gene

Proteins for PIR45248 Gene

Post-translational modifications for PIR45248 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR45248 Gene

Domains & Families for PIR45248 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR45248 Gene

Function for PIR45248 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45248 Gene

Localization for PIR45248 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45248 Gene

Pathways & Interactions for PIR45248 Gene

SuperPathways for PIR45248 Gene

No Data Available

Interacting Proteins for PIR45248 Gene

Gene Ontology (GO) - Biological Process for PIR45248 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45248 Gene

Drugs & Compounds for PIR45248 Gene

No Compound Related Data Available

Transcripts for PIR45248 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45248 Gene

No ASD Table

Relevant External Links for PIR45248 Gene

GeneLoc Exon Structure for
PIR45248

No data available for mRNA/cDNA for PIR45248 Gene

Expression for PIR45248 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45248 Gene

Orthologs for PIR45248 Gene

No data available for Orthologs and Evolution for PIR45248 Gene

Paralogs for PIR45248 Gene

No data available for Paralogs for PIR45248 Gene

Variants for PIR45248 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45248 Gene

Disorders for PIR45248 Gene

No disorders were found for PIR45248 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45248 Gene

Publications for PIR45248 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45248 Gene

Sources for PIR45248 Gene

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