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Aliases for PIR45069 Gene

Subcategory (RNA class) for PIR45069 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR45069 Gene

No Aliases found

ORGUL Members for PIR45069 Gene

Previous GeneCards Identifiers for PIR45069 Gene

  • GC20M001481

No data available for External Ids for PIR45069 Gene

Summaries for PIR45069 Gene

GeneCards Summary for PIR45069 Gene

PIR45069 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR45069 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR45069 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR45069 Gene

Genomics for PIR45069 Gene

GeneHancer (GH) Regulatory Elements for PIR45069 Gene

Promoters and enhancers for PIR45069 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I001499 Enhancer 0.8 ENCODE dbSUPER 550.8 +0.6 614 2.6 ZNF639 SRF USF1 ZBTB11 TEAD2 PRDM10 ATF2 ZNF83 PIR45069 NSFL1C SIRPB2 SDCBP2 FKBP1A SNPH
GH20I001503 Enhancer 1.1 ENCODE dbSUPER 0.8 -2.8 -2824 0.2 ATF1 ARID4B DMAP1 IRF4 SLC30A9 ARID2 ZNF207 ZNF143 ATF7 RUNX3 NSFL1C FKBP1A SDCBP2 SNPH PIR45069 LOC105372499
GH20I001505 Enhancer 0.4 ENCODE dbSUPER 0.8 -4.9 -4867 1.5 SIRPB2 SDCBP2 NSFL1C FKBP1A SNPH PIR45069 LOC105372499
GH20I001494 Enhancer 0.5 Ensembl dbSUPER 0.4 +6.3 6275 0.2 EBF1 NSFL1C SIRPB2 PIR45069
GH20I001493 Enhancer 0.4 FANTOM5 dbSUPER 0.4 +7.3 7252 0.2 SIRPB2 SDCBP2 SIRPA SIRPB1 PIR45069
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR45069 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR45069 Gene

Genomic Locations for PIR45069 Gene
chr20:1,500,948-1,500,976
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr20:1,481,594-1,481,622
(GRCh37/hg19)

Genomic View for PIR45069 Gene

Genes around PIR45069 on UCSC Golden Path with GeneCards custom track

PIR45069 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR45069 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR45069 Gene

Proteins for PIR45069 Gene

Post-translational modifications for PIR45069 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR45069 Gene

Domains & Families for PIR45069 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR45069 Gene

Function for PIR45069 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR45069 Gene

Localization for PIR45069 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR45069 Gene

Pathways & Interactions for PIR45069 Gene

SuperPathways for PIR45069 Gene

No Data Available

Interacting Proteins for PIR45069 Gene

Gene Ontology (GO) - Biological Process for PIR45069 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR45069 Gene

Drugs & Compounds for PIR45069 Gene

No Compound Related Data Available

Transcripts for PIR45069 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR45069 Gene

No ASD Table

Relevant External Links for PIR45069 Gene

GeneLoc Exon Structure for
PIR45069

No data available for mRNA/cDNA for PIR45069 Gene

Expression for PIR45069 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR45069 Gene

Orthologs for PIR45069 Gene

No data available for Orthologs and Evolution for PIR45069 Gene

Paralogs for PIR45069 Gene

No data available for Paralogs for PIR45069 Gene

Variants for PIR45069 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR45069 Gene

Disorders for PIR45069 Gene

No disorders were found for PIR45069 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR45069 Gene

Publications for PIR45069 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR45069 Gene

Sources for PIR45069 Gene

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