Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR44837 Gene

Subcategory (RNA class) for PIR44837 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR44837 Gene

No Aliases found

ORGUL Members for PIR44837 Gene

No data available for External Ids for PIR44837 Gene

Summaries for PIR44837 Gene

GeneCards Summary for PIR44837 Gene

PIR44837 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR44837 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR44837 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR44837 Gene

Genomics for PIR44837 Gene

GeneHancer (GH) Regulatory Elements for PIR44837 Gene

Promoters and enhancers for PIR44837 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J010743 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.4 +14.6 14550 3.5 ZFX ELF3 MNT NKRF POLR2A CEBPG GTF2F1 ZNF687 AHR ZNF24 TEKT5 NUBP1 HNRNPCP4 CIITA ENSG00000256013 SOCS1 PIR44837 GC16P010485
GH16J010752 Enhancer 1 FANTOM5 ENCODE 0.4 +5.5 5526 1.4 SP1 ZNF687 CREM IKZF1 IKZF2 RELA TRIM22 CBFB DPF2 EED CIITA NUBP1 TEKT5 PIR44837 GC16P010485
GH16J010819 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 0.2 -59.7 -59668 1.6 CBFA2T2 EGR1 NRF1 ZKSCAN1 PTBP1 BCOR CREM ZNF16 HNF4A ZMYM3 TVP23A HNRNPCP4 PIR44837 GC16P010485
GH16J010755 Enhancer 0.6 ENCODE 0.7 +3.8 3794 0.2 ZIC2 ZNF629 SCRT2 JUND FOS ZNF26 ZNF335 JUN CIITA HNRNPCP4 PIR44837 NUBP1 GC16P010485
GH16J010777 Enhancer 1 Ensembl ENCODE 0.4 -17.6 -17568 1 SP1 ZNF687 RELA CREM MLLT1 ZBED1 IKZF1 CAVIN1 ZBTB33 RFX1 CIITA TVP23A PIR44837 GC16P010485
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR44837 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR44837 Gene

Genomic Locations for PIR44837 Gene
chr16:10,758,905-10,758,933
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr16:10,852,762-10,852,790
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR44837 Gene

Genes around PIR44837 on UCSC Golden Path with GeneCards custom track

PIR44837 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR44837 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR44837 Gene

Proteins for PIR44837 Gene

Post-translational modifications for PIR44837 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR44837 Gene

Domains & Families for PIR44837 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR44837 Gene

Function for PIR44837 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR44837 Gene

Localization for PIR44837 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR44837 Gene

Pathways & Interactions for PIR44837 Gene

PathCards logo

SuperPathways for PIR44837 Gene

No Data Available

Interacting Proteins for PIR44837 Gene

Gene Ontology (GO) - Biological Process for PIR44837 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR44837 Gene

Drugs & Compounds for PIR44837 Gene

No Compound Related Data Available

Transcripts for PIR44837 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR44837 Gene

No ASD Table

Relevant External Links for PIR44837 Gene

GeneLoc Exon Structure for
PIR44837

No data available for mRNA/cDNA for PIR44837 Gene

Expression for PIR44837 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR44837 Gene

Orthologs for PIR44837 Gene

No data available for Orthologs and Evolution for PIR44837 Gene

Paralogs for PIR44837 Gene

No data available for Paralogs for PIR44837 Gene

Variants for PIR44837 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR44837 Gene

Disorders for PIR44837 Gene

No disorders were found for PIR44837 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR44837 Gene

Publications for PIR44837 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR44837 Gene

Products for PIR44837 Gene

Sources for PIR44837 Gene

Content
Loading form....