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Aliases for PIR44602 Gene

Subcategory (RNA class) for PIR44602 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR44602 Gene

No Aliases found

ORGUL Members for PIR44602 Gene

No data available for External Ids for PIR44602 Gene

Summaries for PIR44602 Gene

GeneCards Summary for PIR44602 Gene

PIR44602 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR44602 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR44602 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR44602 Gene

Genomics for PIR44602 Gene

GeneHancer (GH) Regulatory Elements for PIR44602 Gene

Promoters and enhancers for PIR44602 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J153586 Enhancer 0.5 ENCODE 550.7 +1.2 1235 1.4 RFX1 ZNF266 ZBTB17 IKZF1 ZNF121 PIR44602 CRTC2 SLC27A3 UBAP2L CHTOP CREB3L4 INTS3 ENSG00000238279 S100A13 ILF2
GH01J153572 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.3 -13283 2.2 SP1 ZNF174 RAD21 MAX CTCF REST TRIM22 ZNF143 EGR1 SMARCA5 INTS3 ATP8B2 UBAP2L S100A3 S100A9 S100A7L2 S100A12 S100A4 S100A2 PIR44602
GH01J153596 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +12.2 12233 3.5 SPI1 SP1 MLLT1 SMARCA4 CREM RELA DPF2 IKZF1 POLR2A IKZF2 S100A13 S100A16 ENSG00000285867 PIR44602
GH01J153577 Enhancer 0.7 Ensembl ENCODE 0.4 -7.3 -7302 2 CEBPB JUN RCOR1 EP300 ZFHX2 KLF1 EGR2 S100A16 S100A14 S100A1 CHTOP S100A13 S100A3 SNAPIN ILF2 NPR1 ENSG00000233222
GH01J153578 Enhancer 0.5 FANTOM5 0.4 -8.8 -8762 0.2 PRDM10 ZNF512 SCRT1 S100A3 S100A7L2 PGLYRP3 PIR44602 S100A2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR44602 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR44602 Gene

Genomic Locations for PIR44602 Gene
chr1:153,586,022-153,586,050
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr1:153,558,498-153,558,526
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR44602 Gene

Genes around PIR44602 on UCSC Golden Path with GeneCards custom track

PIR44602 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR44602 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR44602 Gene

Proteins for PIR44602 Gene

Post-translational modifications for PIR44602 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR44602 Gene

Domains & Families for PIR44602 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR44602 Gene

Function for PIR44602 Gene

Animal Model Products

miRNA for PIR44602 Gene

miRTarBase miRNAs that target PIR44602

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for PIR44602 Gene

Localization for PIR44602 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR44602 Gene

Pathways & Interactions for PIR44602 Gene

SuperPathways for PIR44602 Gene

No Data Available

Interacting Proteins for PIR44602 Gene

Gene Ontology (GO) - Biological Process for PIR44602 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR44602 Gene

Drugs & Compounds for PIR44602 Gene

No Compound Related Data Available

Transcripts for PIR44602 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR44602 Gene

No ASD Table

Relevant External Links for PIR44602 Gene

GeneLoc Exon Structure for
PIR44602

No data available for mRNA/cDNA for PIR44602 Gene

Expression for PIR44602 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR44602 Gene

Orthologs for PIR44602 Gene

No data available for Orthologs and Evolution for PIR44602 Gene

Paralogs for PIR44602 Gene

No data available for Paralogs for PIR44602 Gene

Variants for PIR44602 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR44602 Gene

Disorders for PIR44602 Gene

No disorders were found for PIR44602 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR44602 Gene

Publications for PIR44602 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR44602 Gene

Sources for PIR44602 Gene

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