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Aliases for PIR44306 Gene

Subcategory (RNA class) for PIR44306 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR44306 Gene

No Aliases found

ORGUL Members for PIR44306 Gene

No data available for External Ids for PIR44306 Gene

Summaries for PIR44306 Gene

GeneCards Summary for PIR44306 Gene

PIR44306 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR44306 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR44306 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR44306 Gene

Genomics for PIR44306 Gene

GeneHancer (GH) Regulatory Elements for PIR44306 Gene

Promoters and enhancers for PIR44306 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J085209 Enhancer 0.9 dbSUPER 600.7 +0.1 90 0.5 ELF3 CEBPG TFE3 SP1 SP5 RXRA CEBPA GATAD2A RXRB FOXA2 PIR44306 PIR50782 GSE1 COX6CP16
GH16J085208 Enhancer 0.6 dbSUPER 600.7 -0.6 -637 0.3 TRIM24 GMEB1 ZBTB10 ZBTB2 ZNF580 TRIM28 BCOR ADNP HLTF KDM1A PIR44306 PIR50782 GSE1
GH16J085210 Enhancer 1 ENCODE dbSUPER 0.7 +2.5 2469 4.2 ZKSCAN8 SP1 EGR1 RXRA CEBPA GATAD2A CTBP1 FOXA2 IRF2 ZNF792 GSE1 PIR44306 COX6CP16
GH16J085227 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +18.9 18935 4.4 SP1 CBFA2T2 NKRF ZNF687 ZSCAN21 SP7 RELA CREM MLLT1 ZBED1 ENSG00000270184 ENSG00000261243 MEAK7 RNU1-103P ZDHHC7 PIR44306 COX6CP16 GSE1
GH16J085219 Enhancer 1.1 ENCODE dbSUPER 0.4 +11.6 11601 3.2 ZNF121 SP7 SP1 SP5 PRDM1 MZF1 GLIS2 POLR2A PKNOX1 RXRA WFDC1 PIR44306 GSE1 COX6CP16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR44306 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR44306 Gene

Genomic Locations for PIR44306 Gene
chr16:85,209,666-85,209,692
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr16:85,243,272-85,243,298
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR44306 Gene

Genes around PIR44306 on UCSC Golden Path with GeneCards custom track

PIR44306 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR44306 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR44306 Gene

Proteins for PIR44306 Gene

Post-translational modifications for PIR44306 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR44306 Gene

Domains & Families for PIR44306 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR44306 Gene

Function for PIR44306 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR44306 Gene

Localization for PIR44306 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR44306 Gene

Pathways & Interactions for PIR44306 Gene

PathCards logo

SuperPathways for PIR44306 Gene

No Data Available

Interacting Proteins for PIR44306 Gene

Gene Ontology (GO) - Biological Process for PIR44306 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR44306 Gene

Drugs & Compounds for PIR44306 Gene

No Compound Related Data Available

Transcripts for PIR44306 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR44306 Gene

No ASD Table

Relevant External Links for PIR44306 Gene

GeneLoc Exon Structure for
PIR44306

No data available for mRNA/cDNA for PIR44306 Gene

Expression for PIR44306 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR44306 Gene

Orthologs for PIR44306 Gene

No data available for Orthologs and Evolution for PIR44306 Gene

Paralogs for PIR44306 Gene

No data available for Paralogs for PIR44306 Gene

Variants for PIR44306 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR44306 Gene

Disorders for PIR44306 Gene

No disorders were found for PIR44306 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR44306 Gene

Publications for PIR44306 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR44306 Gene

Products for PIR44306 Gene

Sources for PIR44306 Gene

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