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Aliases for PIR44198 Gene

Subcategory (RNA class) for PIR44198 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR44198 Gene

No Aliases found

ORGUL Members for PIR44198 Gene

Previous GeneCards Identifiers for PIR44198 Gene

  • GC01P010366

No data available for External Ids for PIR44198 Gene

Summaries for PIR44198 Gene

GeneCards Summary for PIR44198 Gene

PIR44198 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR44198 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR44198 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR44198 Gene

Genomics for PIR44198 Gene

GeneHancer (GH) Regulatory Elements for PIR44198 Gene

Promoters and enhancers for PIR44198 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J020406 Enhancer 1 Ensembl ENCODE dbSUPER 600.7 -1.1 -1140 6 SP1 RFX1 PRDM10 ZIC2 ZNF341 BMI1 PTBP1 BCOR ZNF768 ADNP PIR44198 ENSG00000226664 VWA5B1 CAMK2N1 LINC01141 GC01P020350
GH01J020410 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +5.7 5748 1.4 CSDE1 SP7 GLIS2 RFX1 ZIC2 ZEB2 ZNF629 PATZ1 ZNF692 BMI1 ENSG00000226487 PIR44198 LINC01141
GH01J020399 Enhancer 0.7 Ensembl dbSUPER 0.7 -4.8 -4840 0.2 HDAC2 PTBP1 ZFHX2 ZNF768 KDM1A EGR2 SMARCA5 PIR44198 LINC01141 GC01P020350
GH01J020380 Enhancer 0.7 Ensembl ENCODE 0.3 -24.7 -24740 1.2 RUNX3 BCL11A FOS BATF ATF2 GLIS1 JUND VWA5B1 MUL1 PIR44198 GC01P020350 LINC01141
GH01J020384 Enhancer 0.5 Ensembl 0.4 -18.4 -18440 5.4 RFX1 POLR2A BMI1 PKNOX1 ZNF623 ZNF664 ZNF24 CAMK2N1 VWA5B1 ENSG00000226664 MUL1 PIR44198 GC01P020350 LINC01141
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR44198 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR44198 Gene

Genomic Locations for PIR44198 Gene
chr1:20,405,541-20,405,570
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr1:10,366,017-10,366,046
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR44198 Gene

Genes around PIR44198 on UCSC Golden Path with GeneCards custom track

PIR44198 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR44198 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR44198 Gene

Proteins for PIR44198 Gene

Post-translational modifications for PIR44198 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR44198 Gene

Domains & Families for PIR44198 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR44198 Gene

Function for PIR44198 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR44198 Gene

Localization for PIR44198 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR44198 Gene

Pathways & Interactions for PIR44198 Gene

PathCards logo

SuperPathways for PIR44198 Gene

No Data Available

Interacting Proteins for PIR44198 Gene

Gene Ontology (GO) - Biological Process for PIR44198 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR44198 Gene

Drugs & Compounds for PIR44198 Gene

No Compound Related Data Available

Transcripts for PIR44198 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR44198 Gene

No ASD Table

Relevant External Links for PIR44198 Gene

GeneLoc Exon Structure for
PIR44198

No data available for mRNA/cDNA for PIR44198 Gene

Expression for PIR44198 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR44198 Gene

Orthologs for PIR44198 Gene

No data available for Orthologs and Evolution for PIR44198 Gene

Paralogs for PIR44198 Gene

No data available for Paralogs for PIR44198 Gene

Variants for PIR44198 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR44198 Gene

Disorders for PIR44198 Gene

No disorders were found for PIR44198 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR44198 Gene

Publications for PIR44198 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR44198 Gene

Products for PIR44198 Gene

Sources for PIR44198 Gene

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