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Aliases for PIR44053 Gene

Subcategory (RNA class) for PIR44053 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR44053 Gene

No Aliases found

ORGUL Members for PIR44053 Gene

Previous GeneCards Identifiers for PIR44053 Gene

  • GC02M230664

No data available for External Ids for PIR44053 Gene

Summaries for PIR44053 Gene

GeneCards Summary for PIR44053 Gene

PIR44053 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR44053 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR44053 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR44053 Gene

Genomics for PIR44053 Gene

GeneHancer (GH) Regulatory Elements for PIR44053 Gene

Promoters and enhancers for PIR44053 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J229801 Enhancer 0.6 ENCODE 650.7 -2.0 -1966 0.2 CTCF ZNF654 TRIM22 RAD21 YY1 ZGPAT SMC3 ZNF143 ZSCAN29 PRDM4 PIR44053 RNU6-613P TRIP12
GH02J229780 Enhancer 0.6 ENCODE 0.4 +18.1 18074 1.5 HDGF CTCF ZNF654 TRIM22 MAX ZBTB25 RAD21 NR2F2 ZFHX2 KLF16 FBXO36 TRIP12 PIR44053 DNER
GH02J229815 Enhancer 0.5 ENCODE 0.4 -16.5 -16534 0.8 MITF FOSL1 GATA3 JUND PIR44053 RNU6-613P TRIP12
GH02J229714 Enhancer 0.8 ENCODE 0.2 +84.3 84348 0.6 ELF3 ZFP64 ARID4B SIN3A DMAP1 ZNF48 ZSCAN9 RARA ZNF335 GLIS2 DNER TRIP12 LOC101928816 FBXO36 PIR44053
GH02J229851 Enhancer 0.8 Ensembl ENCODE 0.2 -53.4 -53447 1.7 PKNOX1 JUN TEAD4 HLF TAL1 CBFA2T3 ELF1 DPF2 NR2F2 NCOR1 RNU6-613P TRIP12 PIR44053
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR44053 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR44053 Gene

Genomic Locations for PIR44053 Gene
chr2:229,799,346-229,799,374
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr2:230,664,062-230,664,090
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR44053 Gene

Genes around PIR44053 on UCSC Golden Path with GeneCards custom track

PIR44053 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR44053 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR44053 Gene

Function for PIR44053 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR44053 Gene

Localization for PIR44053 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR44053 Gene

Pathways & Interactions for PIR44053 Gene

SuperPathways for PIR44053 Gene

No Data Available

Interacting Proteins for PIR44053 Gene

Gene Ontology (GO) - Biological Process for PIR44053 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR44053 Gene

Drugs & Compounds for PIR44053 Gene

No Compound Related Data Available

Transcripts for PIR44053 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR44053 Gene

No ASD Table

Relevant External Links for PIR44053 Gene

GeneLoc Exon Structure for
PIR44053

No data available for mRNA/cDNA for PIR44053 Gene

Expression for PIR44053 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR44053 Gene

Orthologs for PIR44053 Gene

No data available for Orthologs and Evolution for PIR44053 Gene

Paralogs for PIR44053 Gene

No data available for Paralogs for PIR44053 Gene

Variants for PIR44053 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR44053 Gene

Disorders for PIR44053 Gene

No disorders were found for PIR44053 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR44053 Gene

Publications for PIR44053 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR44053 Gene

Sources for PIR44053 Gene

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