Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR43956 Gene

Subcategory (RNA class) for PIR43956 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR43956 Gene

No Aliases found

ORGUL Members for PIR43956 Gene

Previous GeneCards Identifiers for PIR43956 Gene

  • GC02P111639
  • GC02P111946
  • GC02P112178
  • GC02P112411
  • GC02P112818
  • GC02P222044
  • GC02P222063
  • GC02P222170
  • GC02P222073
  • GC02P222074
  • GC02P222075
  • GC02P222088
  • GC02P222168

No data available for External Ids for PIR43956 Gene

Summaries for PIR43956 Gene

GeneCards Summary for PIR43956 Gene

PIR43956 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR43956 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR43956 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR43956 Gene

Genomics for PIR43956 Gene

GeneHancer (GH) Regulatory Elements for PIR43956 Gene

Promoters and enhancers for PIR43956 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J222042 Enhancer 0.2 Ensembl 600.7 -0.3 -314 0.6 GC02P222206 GC02P222207 GC02P222210 GC02P222211 GC02P222215 GC02P222216 PIR43956 PIR62224 PIR42332 PIR53789
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR43956 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR43956 Gene

Genomic Locations for PIR43956 Gene
chr2:222,043,415-222,043,445
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr2:111,454,067-111,454,097
(GRCh37/hg19)
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR43956 Gene

Genes around PIR43956 on UCSC Golden Path with GeneCards custom track

PIR43956 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR43956 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR43956 Gene

Proteins for PIR43956 Gene

Post-translational modifications for PIR43956 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR43956 Gene

Domains & Families for PIR43956 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR43956 Gene

Function for PIR43956 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR43956 Gene

Localization for PIR43956 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR43956 Gene

Pathways & Interactions for PIR43956 Gene

PathCards logo

SuperPathways for PIR43956 Gene

No Data Available

Interacting Proteins for PIR43956 Gene

Gene Ontology (GO) - Biological Process for PIR43956 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR43956 Gene

Drugs & Compounds for PIR43956 Gene

No Compound Related Data Available

Transcripts for PIR43956 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR43956 Gene

No ASD Table

Relevant External Links for PIR43956 Gene

GeneLoc Exon Structure for
PIR43956

No data available for mRNA/cDNA for PIR43956 Gene

Expression for PIR43956 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR43956 Gene

Orthologs for PIR43956 Gene

No data available for Orthologs and Evolution for PIR43956 Gene

Paralogs for PIR43956 Gene

No data available for Paralogs for PIR43956 Gene

Variants for PIR43956 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR43956 Gene

Disorders for PIR43956 Gene

No disorders were found for PIR43956 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR43956 Gene

Publications for PIR43956 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR43956 Gene

Products for PIR43956 Gene

Sources for PIR43956 Gene

Content
Loading form....