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Aliases for PIR43863 Gene

Subcategory (RNA class) for PIR43863 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR43863 Gene

No Aliases found

ORGUL Members for PIR43863 Gene

No data available for External Ids for PIR43863 Gene

Summaries for PIR43863 Gene

GeneCards Summary for PIR43863 Gene

PIR43863 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR43863 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR43863 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR43863 Gene

Genomics for PIR43863 Gene

GeneHancer (GH) Regulatory Elements for PIR43863 Gene

Promoters and enhancers for PIR43863 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J002697 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +44.4 44378 5.5 SP1 POLR2A ZNF687 SP7 CREM MLLT1 ZNF404 IKZF1 CREB1 GLIS2 GNG7 ENSG00000276097 LSM7 SF3A2 LOC100288123 CACTIN-AS1 CACTIN ZNF77 ENSG00000267139 DOT1L
GH19J002663 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.3 8279 2.5 NKRF CREM RAD21 IKZF1 RFX1 ATF1 REST PKNOX1 POLR2A NRF1 GNG7 SPPL2B TLE5 PIR43863 ENSG00000276097
GH19J002650 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -5.5 -5491 0.8 RXRA GATAD2A RXRB SOX13 TCF12 ZNF205 SAP130 TEAD1 KDM6A GABPB1 ENSG00000267749 PIR43863 GNG7
GH19J002648 Enhancer 1.2 Ensembl ENCODE 0.4 -7.6 -7587 0.6 CC2D1A CTCF ZNF121 ZNF384 ZSCAN21 ZBTB7A SP7 KLF14 MLLT1 RAD21 CACTIN ZNF77 ZNF554 GNA11 LMNB2 TLE2 SF3A2 ATP8B3 ENSG00000267749 PIR43863
GH19J002659 Enhancer 0.8 Ensembl dbSUPER 0.7 +4.5 4513 2 PRDM1 ZNF512 ZNF585B TRIM28 CTCF ZNF366 ZNF143 ZNF280D ZNF77 SLC39A3 GNG7 DIRAS1 CACTIN ZNF555 ZNF554 LSM7 PIR43863 ENSG00000276097
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR43863 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR43863 Gene

Genomic Locations for PIR43863 Gene
chr19:2,656,288-2,656,314
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr19:2,656,286-2,656,312
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR43863 Gene

Genes around PIR43863 on UCSC Golden Path with GeneCards custom track

PIR43863 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR43863 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR43863 Gene

Proteins for PIR43863 Gene

Post-translational modifications for PIR43863 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR43863 Gene

Domains & Families for PIR43863 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR43863 Gene

Function for PIR43863 Gene

Phenotypes From GWAS Catalog for PIR43863 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR43863 Gene

Localization for PIR43863 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR43863 Gene

Pathways & Interactions for PIR43863 Gene

PathCards logo

SuperPathways for PIR43863 Gene

No Data Available

Interacting Proteins for PIR43863 Gene

Gene Ontology (GO) - Biological Process for PIR43863 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR43863 Gene

Drugs & Compounds for PIR43863 Gene

No Compound Related Data Available

Transcripts for PIR43863 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR43863 Gene

No ASD Table

Relevant External Links for PIR43863 Gene

GeneLoc Exon Structure for
PIR43863

No data available for mRNA/cDNA for PIR43863 Gene

Expression for PIR43863 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR43863 Gene

Orthologs for PIR43863 Gene

No data available for Orthologs and Evolution for PIR43863 Gene

Paralogs for PIR43863 Gene

No data available for Paralogs for PIR43863 Gene

Variants for PIR43863 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR43863 Gene

Disorders for PIR43863 Gene

No disorders were found for PIR43863 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR43863 Gene

Publications for PIR43863 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR43863 Gene

Products for PIR43863 Gene

Sources for PIR43863 Gene

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