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Aliases for PIR43677 Gene

Subcategory (RNA class) for PIR43677 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR43677 Gene

No Aliases found

ORGUL Members for PIR43677 Gene

Previous GeneCards Identifiers for PIR43677 Gene

  • GC0YP010045
  • GC0YP010052
  • GC0YP010059
  • GC0YP010072
  • GC0YP010201
  • GC0YP010202
  • GC0YP010203
  • GC0YP010204
  • GC0YP010205
  • GC0YP010207
  • GC0YP010209

No data available for External Ids for PIR43677 Gene

Summaries for PIR43677 Gene

GeneCards Summary for PIR43677 Gene

PIR43677 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR43677 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR43677 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR43677 Gene

Genomics for PIR43677 Gene

GeneHancer (GH) Regulatory Elements for PIR43677 Gene

Promoters and enhancers for PIR43677 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0YI010200 Enhancer 0.5 ENCODE 550.8 0.0 -26 0.3 SP1 ATF3 ZBTB33 ELF1 FOSL2 ENSG00000225840 GC0YM010200 GC0YP010213 GC0YP010215 GC0YP010217 GC0YP010219 RNA5-8SP6 PIR34208 PIR43677
GH0YI010197 Enhancer 0.2 ENCODE 550.8 -1.8 -1815 1.3 ENSG00000225840 GC0YM010200 GC0YP010213 GC0YP010215 GC0YP010217 GC0YP010219 LOC101059962 RNA18SP2 RNA5-8SP6 PIR34208
GH0YI010627 Enhancer 0.2 ENCODE 0 +426.8 426847 0.2 ENSG00000273858 GC0YP010213 GC0YP010215 GC0YP010217 PIR43677
GH0YI010629 Enhancer 0.2 ENCODE 0 +429.7 429742 0.4 ENSG00000273858 GC0YP010213 GC0YP010215 GC0YP010217 PIR43677
GH0YI010628 Enhancer 0.2 ENCODE 0 +427.2 427197 0.5 ENSG00000273858 GC0YP010213 GC0YP010215 GC0YP010217 PIR43677
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR43677 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR43677 Gene

Genomic Locations for PIR43677 Gene
chrY:10,200,235-10,200,265
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chrY:10,037,844-10,037,874
(GRCh37/hg19)

Genomic View for PIR43677 Gene

Genes around PIR43677 on UCSC Golden Path with GeneCards custom track

PIR43677 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR43677 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR43677 Gene

Proteins for PIR43677 Gene

Post-translational modifications for PIR43677 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR43677 Gene

Domains & Families for PIR43677 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR43677 Gene

Function for PIR43677 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR43677 Gene

Localization for PIR43677 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR43677 Gene

Pathways & Interactions for PIR43677 Gene

SuperPathways for PIR43677 Gene

No Data Available

Interacting Proteins for PIR43677 Gene

Gene Ontology (GO) - Biological Process for PIR43677 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR43677 Gene

Drugs & Compounds for PIR43677 Gene

No Compound Related Data Available

Transcripts for PIR43677 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR43677 Gene

No ASD Table

Relevant External Links for PIR43677 Gene

GeneLoc Exon Structure for
PIR43677

No data available for mRNA/cDNA for PIR43677 Gene

Expression for PIR43677 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR43677 Gene

Orthologs for PIR43677 Gene

No data available for Orthologs and Evolution for PIR43677 Gene

Paralogs for PIR43677 Gene

No data available for Paralogs for PIR43677 Gene

Variants for PIR43677 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR43677 Gene

Disorders for PIR43677 Gene

No disorders were found for PIR43677 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR43677 Gene

Publications for PIR43677 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR43677 Gene

Sources for PIR43677 Gene

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