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Aliases for PIR43306 Gene

Subcategory (RNA class) for PIR43306 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR43306 Gene

No Aliases found

ORGUL Members for PIR43306 Gene

Previous GeneCards Identifiers for PIR43306 Gene

  • GC10M047081

No data available for External Ids for PIR43306 Gene

Summaries for PIR43306 Gene

GeneCards Summary for PIR43306 Gene

PIR43306 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR43306 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR43306 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR43306 Gene

Genomics for PIR43306 Gene

GeneHancer (GH) Regulatory Elements for PIR43306 Gene

Promoters and enhancers for PIR43306 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J046468 Enhancer 1 FANTOM5 ENCODE 650.7 +0.6 581 1.2 BCOR CTCF RB1 SIN3A ZMYM3 RAD21 CC2D1A ARID2 ZNF143 SMC3 PIR43306 LINC00842 GPRIN2 NPY4R ENSG00000285402
GH10J046465 Promoter 0.7 EPDnew 650.7 -2.0 -1976 0.1 CTCF ZNF512 PIR43306 NPY4R HNRNPA1P33 ENSG00000285402
GH10J046467 Enhancer 0.4 ENCODE 650.7 -0.3 -348 0.1 MLLT1 REST PIR43306 NPY4R HNRNPA1P33 ENSG00000285402
GH10J046470 Promoter/Enhancer 1.1 EPDnew ENCODE 0.7 +2.6 2564 0.2 SP1 ZFHX2 POLR2A MAX SIN3A ZBTB33 MYC EGR2 ZBTB17 NPY4R PIR43306 ENSG00000285402
GH10J046471 Enhancer 0.6 ENCODE 0.7 +2.4 2362 0.2 SP1 ZFHX2 POLR2A MAX SIN3A ZBTB33 MYC EGR2 ZBTB17 NPY4R PIR43306 ENSG00000285402
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR43306 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR43306 Gene

Genomic Locations for PIR43306 Gene
chr10:46,467,954-46,467,981
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr10:47,081,469-47,081,496
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR43306 Gene

Genes around PIR43306 on UCSC Golden Path with GeneCards custom track

PIR43306 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR43306 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR43306 Gene

Function for PIR43306 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR43306 Gene

Localization for PIR43306 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR43306 Gene

Pathways & Interactions for PIR43306 Gene

SuperPathways for PIR43306 Gene

No Data Available

Interacting Proteins for PIR43306 Gene

Gene Ontology (GO) - Biological Process for PIR43306 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR43306 Gene

Drugs & Compounds for PIR43306 Gene

No Compound Related Data Available

Transcripts for PIR43306 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR43306 Gene

No ASD Table

Relevant External Links for PIR43306 Gene

GeneLoc Exon Structure for
PIR43306

No data available for mRNA/cDNA for PIR43306 Gene

Expression for PIR43306 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR43306 Gene

Orthologs for PIR43306 Gene

No data available for Orthologs and Evolution for PIR43306 Gene

Paralogs for PIR43306 Gene

No data available for Paralogs for PIR43306 Gene

Variants for PIR43306 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR43306 Gene

Disorders for PIR43306 Gene

No disorders were found for PIR43306 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR43306 Gene

Publications for PIR43306 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR43306 Gene

Sources for PIR43306 Gene

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